| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0916 |
|---|
| Symbol | |
|---|
| ID | 8418736 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 1086451 |
|---|
| End bp | 1087053 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 645037486 |
|---|
| Product | MotA/TolQ/ExbB proton channel |
|---|
| Protein accession | YP_003197785 |
|---|
| Protein GI | 258405043 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0811] Biopolymer transport proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.931657 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCTTC TGGACAAGGG CGGGATCATG ATCTGGCCCA TATTGGGATT TTCCATACTC
ATCCTGGCGG TTATCCTGGA CCGTTTGCTG GCCCTGGCCA GCTTCAGAAT GCTCGCCCCG
GCAATGGTGT CGCAAGTCAA GGAATTGATC CGCGAGGGCA GGGAGGATGA AGCAAAGGCC
CTGCTCGAGG AGGAAGGACC GGGGTCGGCC AGGATGTTTC TCGCTATTGT CTCGGTCGAG
GGCAGGAAAA GACGGGAACA AGCCGCCTCA CGCACCGGGG AAGCCCTTTT GTTCCATCTC
GGCCGGAGGC TGCCGGTTTT GTCTGCTGGT GCGGCCGCAG CCCCGCTCAT GGGACTGTTG
GGAACAGTGC TGGGGATGAT CAACGTCTTC TCCAGGGTCT CAAGTGCTCC CGGAGGGGTT
GATATCGCCT TGTTGGCCGA CGGTATCTGG CAGGCGTTGC TGACCACAGC AGCGGGTCTT
GGCGTGGCCA TCCCGTCTCT TCTGGCCTAC CATTTCCTGA TCCGCCTCCA GGACAAGATC
GGGTTCAGGA TGGCCCATGA AGGCCAGAAT TTTGTGGACG AGTTGGAGGA CATGGGACGG
TGA
|
|---|
| Protein sequence | MMLLDKGGIM IWPILGFSIL ILAVILDRLL ALASFRMLAP AMVSQVKELI REGREDEAKA
LLEEEGPGSA RMFLAIVSVE GRKRREQAAS RTGEALLFHL GRRLPVLSAG AAAAPLMGLL
GTVLGMINVF SRVSSAPGGV DIALLADGIW QALLTTAAGL GVAIPSLLAY HFLIRLQDKI
GFRMAHEGQN FVDELEDMGR
|
|---|
| |