| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0909 |
|---|
| Symbol | |
|---|
| ID | 8418729 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 1079185 |
|---|
| End bp | 1079598 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645037479 |
|---|
| Product | Cupin 2 conserved barrel domain protein |
|---|
| Protein accession | YP_003197778 |
|---|
| Protein GI | 258405036 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000000167326 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGACGGT GTGTTCTGAC AGCGGTGATG ATGGTGTTCT TGGTCCCTTC GCTCTGGGCC
GGAAGCGGTC CCGGAGTGCG CGTCGAGCAT TTGGCCCAAA CGAGCCAGAG TTGGAATGCG
GCCGAGTTGC CCGGGTATCC GGCAGGGCAA CCGGAGGTGA CGATTCTGCG GATCACTATC
CCCAAAGGGG CTGTCCTGCC GCGACATGCG CATCCGGTCA TCAATGCCGG GGTGCTTTTG
CGCGGGGAGT TGACGGTCGA GACCGAAACG GGGAAGACCC TGCGTCTTCA AGCCGGCGAG
GCCATCGTCG AAGTGGTTGA TACCTGGCAT TCTGGAGAAA ATACCGGTGA TGGACCGGCG
GAGATCATTG TCTTTTATGC CGGGAGCAAA GGCCGGCCGA TTACCGTCAA ATAG
|
|---|
| Protein sequence | MRRCVLTAVM MVFLVPSLWA GSGPGVRVEH LAQTSQSWNA AELPGYPAGQ PEVTILRITI
PKGAVLPRHA HPVINAGVLL RGELTVETET GKTLRLQAGE AIVEVVDTWH SGENTGDGPA
EIIVFYAGSK GRPITVK
|
|---|
| |