| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0891 |
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| Symbol | |
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| ID | 8418711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1055153 |
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| End bp | 1056073 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645037461 |
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| Product | integrase family protein |
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| Protein accession | YP_003197760 |
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| Protein GI | 258405018 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.180709 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGAGC AGTCGAGGTT GCCGGAGACG GTGGAAACCT TTTTGGCCTA TCTTGACGGA
CAGCGTGGGG CTTCCCCGGC GACGGTTCGG GCCTACCGCC GAGATCTGGA ACAATTTGAG
GCGGTTTTGC GCCGGCGTGG TCTTGATATG GACCGGCCGC AGCAGATCGA CCGTGAGGCG
GTCCAGGGGT TTGCCGCGGA TCTGCACCGT CAGGGCCTGC GGCGCAGCAG TGTCAGTCGG
AAGCTTTCCG CTGTGCGCCG TTTTTTCCGG TTCTGTTTGC AACGGCAATG GGTGGACACG
AACCCCGCTC ACAGCGTGGC CAACCCCAAG CAGGAAGTCC GCCACCCCAA GGTCCTGACC
GTTGAGCAGG CCCTGGAGTT GATGGACACC CACCTGCCCA ACGACCCCAA AGGGTGTCGC
GATCTCGCCC TGGCCGAATT GTTGTACGGG TCCGGGCTGC GGATCAGCGA GGCCCTCCAA
CTCGACATCG ATGATATCGA ACCGGGTCGG GGCGTGGTCC GGGTCGTGGG CAAAGGGGGA
AAAGAGCGGT TGGCGCCGTT GACTGAACCG GGACAGTCCC GGCTGCGGCG TTACCTTGAG
CAGCGGCGGG CTTTTGTTGT CGACCCGCAG GAACCTGCCC TTTTTCTGGG GTTGCGGGGG
AAACGACTGC AACGGCGGGA AGCCAATCGC ATCCTCGCTC GCCTCTCCCA AACCGCCGGT
CTGCCCGAGG AGATCAGTCC TCACGTCCTG CGGCACAGTT TTGCCACCCA TCTGTTGCGT
TCAGGGGCGG ATCTGCGTTC CGTACAGGAA CTGCTGGGCC ATTCTCGCCT GAGCACCACC
CAACGCTACA CCCACCTCAG CCTGGACGGG ATCATGCAGA CCTACGACCA GGCCCATCCC
AAAGCCAAGA AAAACGAGTA G
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| Protein sequence | MSEQSRLPET VETFLAYLDG QRGASPATVR AYRRDLEQFE AVLRRRGLDM DRPQQIDREA
VQGFAADLHR QGLRRSSVSR KLSAVRRFFR FCLQRQWVDT NPAHSVANPK QEVRHPKVLT
VEQALELMDT HLPNDPKGCR DLALAELLYG SGLRISEALQ LDIDDIEPGR GVVRVVGKGG
KERLAPLTEP GQSRLRRYLE QRRAFVVDPQ EPALFLGLRG KRLQRREANR ILARLSQTAG
LPEEISPHVL RHSFATHLLR SGADLRSVQE LLGHSRLSTT QRYTHLSLDG IMQTYDQAHP
KAKKNE
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