Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0889 |
Symbol | |
ID | 8418709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 1053098 |
End bp | 1053883 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 645037459 |
Product | hypothetical protein |
Protein accession | YP_003197758 |
Protein GI | 258405016 |
COG category | [S] Function unknown |
COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR02795] tol-pal system protein YbgF |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.189152 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCAGA CAGATACCAC CCACACAGCC CGGAGCAAGC GATCCGGAGA TGCGTTGACG GGGCCTTCGC CTCTGTGGCG GTTGTTTTGG GGATGCAGTG GACTGGCGGT GGCCGTGTGT ATCGGCATGG TAGTGGCAGT CATCTCCGGT GAAGGCCGTT TGGGAGCCAC GCAAGAGCAA ACTGTCGCCC AGTCTGAAAT GGAGTCCGCA TCCAACAGCA CCATCGCACT GCCCCCTGTG CAGCGCTTTC CAGTCAATCG GTCTTTTCGT CGCGCTGACA GCTTGGGGCG TGAAGACAAG GGAAAAGCGG CGGAGGCGAA TCAGACGGCC CGTTCCACGT CCCCGCTGCC CTCTCCACCA CCGTGCGGGA CCGAGAGCTC TCTTCCAAAG AATGTGGAGT CCCCGCAAGC GGTATATCGC TCGGCCCTGC ACCTGCTGCA CGCTGAGCAA CCGCAAGCGG CTCGCGAACG GTTGCGGACG TTTCTGAATC ACTATGCAGA CCACTCCCTG GCTTCCAACG CCCGGTATTG GCTCGGTGAG ACCTGGTACA GCCAGCAGGC CTACACCAAG GCCATCGCGA TCTGGAACGA CGCGCTCCAG CGCAGACCTG ATTCGCACAA GGCGCCAGCG ATGTTGCTCA AGATCGGCTA TGCCCGCTTT GAACTCGGCC AAAACGACAA GGGCCGTCTG AGTTTGCAAT GTCTGTTGCG AACCGACCCA CCGCCGCGTA TCGCAACGTT GGCCAGAAAA AAATTGGCCG AGGGGTCCTG CGATGGCCGC TCCTGA
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Protein sequence | MQQTDTTHTA RSKRSGDALT GPSPLWRLFW GCSGLAVAVC IGMVVAVISG EGRLGATQEQ TVAQSEMESA SNSTIALPPV QRFPVNRSFR RADSLGREDK GKAAEANQTA RSTSPLPSPP PCGTESSLPK NVESPQAVYR SALHLLHAEQ PQAARERLRT FLNHYADHSL ASNARYWLGE TWYSQQAYTK AIAIWNDALQ RRPDSHKAPA MLLKIGYARF ELGQNDKGRL SLQCLLRTDP PPRIATLARK KLAEGSCDGR S
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