| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0884 |
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| Symbol | |
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| ID | 8418703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1043840 |
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| End bp | 1047046 |
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| Gene Length | 3207 bp |
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| Protein Length | 1068 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645037453 |
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| Product | SNF2-related protein |
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| Protein accession | YP_003197753 |
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| Protein GI | 258405011 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00950493 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCTG AAAACACAAC TGTCGAACAT ATCCTGAAAG ACTTCGTTGA AGATTCGATT
CCAGAGCATA TTCTGGAAGG CGCCCAGGAC ATTCTCAGCG ATGAGGGCGT TCAAAAAATA
GACATCAAAA AACGTGAGAA TTATTGGGAT ATTGACGGCC ACATCCAGGC CGAGGATTTC
CAGATCTACA ATTCGGAAAT CGGGATCAAC CTGGAAGATG GCGCCCTGAA TTTTTTCTGC
AACTGCCCGG AATCCTTTTC CGGCATCTGC CGCCACGTTG GGGCCACCCT GTTGGAGATG
CTCAAATCCT TCAACGGCCA CAGCGAACAG GAAACCGCGG CCCCGCGCAG TGATTGGCGG
CAGACCTTTC GCGGCTTTTT CGCTACCCAG CCCGAGCCCG AACCCGGCAG CCATTACCTT
ATTTTCCGGT TCTACCCCGA ACCCGGACGT TTGAAAGTCG GCTTTTCCCG GGCACGGCAG
AACAAATCCG GCCTGTCCCG GGTCCAAAAT CCGGTGACCC TTGAACAGAT CATCCGCAAT
CCTGAATGGT CTGAAGGGAG TTCGGACCTG CCGACCGTAT GCCGCCAAAT CGGTGAATTC
CTGGATTATT TCGGCCAGGT TGTCGAAATC CCCAGTGGAC TGATGACCTG GTTTCTCTGG
GCGGTGCGCA ATGAGTATTA CCTCTTTTGG CAGGATTCGG ACCAACCCGT GTGCATCGAA
CCCCAAACCA TGCGGCTCCA ACTCAGCCCC AAACTCTCAG AGCACGGGTT GGAATTCGAC
ATCATGCTCG GCCGGGAAGG CAAGGTGCCC TTCTCCATCA AGGGTCAGGA ACTCTTCTTC
TACGGCGATA TGCCGTTGTG GGTCTTGTGG CGCAACAGCT TTTATCCGGT GCAAACGAGC
TTGTCCGCCA AGCTGATCCA GGAATTGGTC ATGGGCGGTC CGGTCATCCC CCACGCCGAT
ATTTCCGAAT TCCTGGACCG GGTCTGGACC CAGATCCCCG CCTCTGACCT CCACGGCCAG
GAAGAATTTC TGGAGCGCAT GCAGCCCATC TTCGTCCCGG CAACGTACAA CCCAAAACTG
TTCATGGATG AGGAAGGCAG CCTGCTGACC CTGGAGATCC AGAACGTCTA CGAAACCGAA
CACGGCGAAA TCACCCTCCC CGGCCCCAAC CAGGATCTGC AGACCGGCAG TTACCAATGG
GGTGCGGAAT CCTTTCTTGT CCGACGCTCT CAGGACGAAG AAGCCGAGCT GATCAACGAA
CTCCAGGAGT TGAATTTCCA GCCACGGTCC AATTCGATCT GGTTCCTGGA GCCCGAGGAG
GCCATTACCT TTTTGCTCGA CGCCTACCCC AAGCTGATCG AAAAATACCG TATCTTTGGG
GAGAAGAACC TGTCGCGCTA CAAGGTCCGC CTCAGTCAGC CCAATATCGT GGCCAAGGTC
GAACAGGACG AAGAGGACGA AAAATGGTTC GATCTCGATC TGGCCGTGGA GTACGACGAT
GTCCGGGTCC CCATCGACAA GATCTGGAAA GCCTGGACCC AGGGCAAGCG GTACGTCCAG
CTCAAGGACG GCTCCTACAC CAGTCTGCCC GAATCCTGGC TGCGCAAGCT CGGCCACAAG
CTCGAGGCCA TGGGCATGGA CCCCAGTCAG CCGCCCAAGG ACAAGTTCCA AAAATACGAA
GCGCCGGCGC TGGACAAAAT ACTCGAAGAT GTCCCCGAAC CGGAAACCGA TTCCTTCTGG
GACTCCCTGC GCGAAAAGAT CCACAATTTC GAGCAGGTCG AGCAGGTCGA GCCGCCGAAG
CACCTCAACG CCACCCTGCG CCCCTACCAG TTGCAGGGAG CGAGCTTCCT CAATTTCCTC
AAGGAATACG ATTTTGGTGG TATCCTGGCT GACGAAATGG GGCTGGGGAA GACAGTCCAG
ACCCTGGCTT TTTTACAACT CATGATCGAA CGCGGCCAAT CGGGACCGAA CCTCATCGTG
GTCCCGACCT CAGTTTTGCC CAACTGGGAG CGCGAGGCCC AGAAATTCGT GCCCAACATG
CGCCAATTGG TCATCTACGG CGCACGACGG GAAAATCTGT TCAAGCAGAT CTCCGAATCC
GACTTGGTTA TCACCACCTA CGCTTTGCTT CGGCGCGATC TGGAGGAACT CAACAAACAC
CGGTTCAACA CGGTCATCCT GGACGAAGCC CAGAATATCA AAAATCCGAA CACCATCACC
GCCCGTTCGG TGCGCAAGAT CAACGCCTCC TTCAGGATGT GCCTCTCCGG TACGCCCATT
GAAAACAACC TCCTGGAATT GTGGTCGTTG TTCGAATTCC TCATGCCCGG ATTCCTCGGT
TCGCAAAACG CCTTTCAAAA AGGCTTCGTC AAACCGATCA AGGATGGCGA CCAGGAAAGC
CTGGAGTATC TGCGCAACCG GGTCAAACCC TTTATTCTGC GACGCACGAA GACCGAAGTG
GCCAAGGATC TGCCGCCCAA GGTCGAAAAC GTCCACTACG CTGCCCTTAT CGACGAGCAG
ATGGAACTCT ATGCCTCCCT GGCCAAAAAG CTCAAAGAGC AGGTCCTGCG CGACGTCGAT
GAAAAAGGGA TCGCCAAGAG TCAGATGTCT ATTTTGGACG CCTTGCTCAA GCTGCGGCAG
ATCTGCTGCC ACCCGCGGCT GCTCAAGCTG GACATGCCGG GCGTGTCCAC CAATCTTCCC
TCCGGGAAAT TCGAGACCTT CAAGGACCTG GTCACCGGTA TCATCGACGA CGGACACAAG
GTCCTGGTGT TCTCCCAGTT TGTCCAGATG CTGCACATCA TTCGTTCCTG GCTGTCCATG
AACAAGGTCC CCTTCGCCTA CCTCGACGGA ACCTCCAAGG ATCGCTTCGA GCAGGTGGAG
AACTTCAACA ACAACCCCGA CATCCCCATT TTCCTGATCT CCCTCAAGGC CGGGGGGACG
GGCCTGAACC TGACCTCCGC CGACTATGTC ATCCACTACG ACCCATGGTG GAACCCGGCT
GTGGAAGACC AGGCCACGGA CCGGACCCAC CGCATCGGAC AGACCAAAAA GGTCTTTTCC
TATAAACTGA TCTGCGAAAA TACGGTCGAA GAAAAGATCC TCAAGCTCCA GGAACAGAAA
AAGGGAGTGG CCGAGGCCAT CATCCCCGGC CAGGACCATT GGAAATCCCT GACCCGCAAC
GACCTGGAAA TGTTGTTCGA AATATAA
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| Protein sequence | MTAENTTVEH ILKDFVEDSI PEHILEGAQD ILSDEGVQKI DIKKRENYWD IDGHIQAEDF
QIYNSEIGIN LEDGALNFFC NCPESFSGIC RHVGATLLEM LKSFNGHSEQ ETAAPRSDWR
QTFRGFFATQ PEPEPGSHYL IFRFYPEPGR LKVGFSRARQ NKSGLSRVQN PVTLEQIIRN
PEWSEGSSDL PTVCRQIGEF LDYFGQVVEI PSGLMTWFLW AVRNEYYLFW QDSDQPVCIE
PQTMRLQLSP KLSEHGLEFD IMLGREGKVP FSIKGQELFF YGDMPLWVLW RNSFYPVQTS
LSAKLIQELV MGGPVIPHAD ISEFLDRVWT QIPASDLHGQ EEFLERMQPI FVPATYNPKL
FMDEEGSLLT LEIQNVYETE HGEITLPGPN QDLQTGSYQW GAESFLVRRS QDEEAELINE
LQELNFQPRS NSIWFLEPEE AITFLLDAYP KLIEKYRIFG EKNLSRYKVR LSQPNIVAKV
EQDEEDEKWF DLDLAVEYDD VRVPIDKIWK AWTQGKRYVQ LKDGSYTSLP ESWLRKLGHK
LEAMGMDPSQ PPKDKFQKYE APALDKILED VPEPETDSFW DSLREKIHNF EQVEQVEPPK
HLNATLRPYQ LQGASFLNFL KEYDFGGILA DEMGLGKTVQ TLAFLQLMIE RGQSGPNLIV
VPTSVLPNWE REAQKFVPNM RQLVIYGARR ENLFKQISES DLVITTYALL RRDLEELNKH
RFNTVILDEA QNIKNPNTIT ARSVRKINAS FRMCLSGTPI ENNLLELWSL FEFLMPGFLG
SQNAFQKGFV KPIKDGDQES LEYLRNRVKP FILRRTKTEV AKDLPPKVEN VHYAALIDEQ
MELYASLAKK LKEQVLRDVD EKGIAKSQMS ILDALLKLRQ ICCHPRLLKL DMPGVSTNLP
SGKFETFKDL VTGIIDDGHK VLVFSQFVQM LHIIRSWLSM NKVPFAYLDG TSKDRFEQVE
NFNNNPDIPI FLISLKAGGT GLNLTSADYV IHYDPWWNPA VEDQATDRTH RIGQTKKVFS
YKLICENTVE EKILKLQEQK KGVAEAIIPG QDHWKSLTRN DLEMLFEI
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