| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0883 |
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| Symbol | |
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| ID | 8418702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1042349 |
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| End bp | 1043749 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645037452 |
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| Product | RNA-directed DNA polymerase (Reverse transcriptase) |
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| Protein accession | YP_003197752 |
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| Protein GI | 258405010 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00469922 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAACG GAGCCGCAGA AGGACGGGCT GGGACGCCCG TCGCCACACC CGAGGGTAGG
GGACGGAATC CCCGAGAGTA CGGTAGTGGT GCGTCAAGCG TCACGGCAAC GAAGGAGTAC
TCCCATCCGG AGCAGCAGAG TTTGATGGAA GCGGTGGTCG GACGCGAGAA CATGCTTGCG
GCCTACAAGC GTGTACGCGC CAACAAAGGC GTCCCCGGAG TCGACGGCAT GAGCGTCAAC
GACGTATGGG GATATTGCAC GCTCAACTGG GCCCGAATCA AAGAGGAGTT GCTGGACGGA
CGGTACGAGC CGCAGCCGGT GCTCGGGGTG CAAATCCCTA AACCCGGCGG CGGGGTGCGC
CAACTGGGCA TCCCGACGGC GCTGGACCGC CTGATACAGC AGGCGCTGCA CCAGGTGCTC
TCCCCCATTT TCAACCCTCA CTTCTCCGGA TCCAGCTACG GCTTCCGGCC CGGTCGAAGT
GCGCATCAGG CCGTGCTCAA GGCACGGGAG CATGCTGCCG CCGGCAAACG GTGGGTCGTG
GACATGGACC TGGAGAAGTT CTTCGACCGC GTGAACCACG ACGTGCTCAT GGCGCGCGTG
GCCCGCAAGG TGAAGGACAA GCGGGTGCTC GCCCTCATCC GGCGTTACCT GCAAGCGGGG
CTGATGCAGG GGGGAATTGC ATCGAAACGA AAGGAGGGCA CGCCGCAAGG CGGCCCCCTC
TCGCCGCTCT TGTCCAACAT CCTTCTGGAT GACCTGGACA AGGAGCTTGA ACGCAGAGGC
CACGCGTTCT GCCGATACGC CGACGACTGC AATATCTACG TGCAGACAAA ACGGTCCGGC
GAACGCGCAA TGGCCTCGAT CACCCGGTTT CTGACAGAAC GGTTGAAGTT GAGGGTCAAC
GCGGATAAGA GCGCGGTTGA CCGGCCATGG AAAAGGAAAT TCCTTGGGTA CTCGATGACC
TGGCATACGC AGCCGCGGCT CAAGGTTGCG CCCAGTGTGG TCAAACGCCT GAAACAGGCG
GTACGGGAGG AATTTCGACG TGGGCGGGGA CGGTCGCTCA AGAAGACGAC AGACACCCTT
GCGCCGAAAC TGCGAGGCTG GATGAACTAC TTCAAGCTGG CGGAGGTAAA GGGAGTTTTT
GAAGAACTGG ACATGTGGAT TCGCCGCAGA TTGCGCAATA TCCTGTGGCG GCATTGGAAA
CGACCCTACG CCCGAGCAAG GAACCTGATT CGCCGGGGAC TGACTGAAGA GCGCGCCTGG
AAATCCGCCA TCAACGGCCG CGGGCCATGG TGGAACTCCG GCGCATCGCA TATGAACCAG
GCATTCCCCA AGAAATACTT TGATTCACTT GGACTCGTGT CACTGCAAGA TCAACTTCGC
AAAGCTCAAA GTGTCAGGTG A
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| Protein sequence | MTNGAAEGRA GTPVATPEGR GRNPREYGSG ASSVTATKEY SHPEQQSLME AVVGRENMLA
AYKRVRANKG VPGVDGMSVN DVWGYCTLNW ARIKEELLDG RYEPQPVLGV QIPKPGGGVR
QLGIPTALDR LIQQALHQVL SPIFNPHFSG SSYGFRPGRS AHQAVLKARE HAAAGKRWVV
DMDLEKFFDR VNHDVLMARV ARKVKDKRVL ALIRRYLQAG LMQGGIASKR KEGTPQGGPL
SPLLSNILLD DLDKELERRG HAFCRYADDC NIYVQTKRSG ERAMASITRF LTERLKLRVN
ADKSAVDRPW KRKFLGYSMT WHTQPRLKVA PSVVKRLKQA VREEFRRGRG RSLKKTTDTL
APKLRGWMNY FKLAEVKGVF EELDMWIRRR LRNILWRHWK RPYARARNLI RRGLTEERAW
KSAINGRGPW WNSGASHMNQ AFPKKYFDSL GLVSLQDQLR KAQSVR
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