| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0877 |
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| Symbol | |
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| ID | 8418696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1034588 |
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| End bp | 1036261 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645037446 |
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| Product | cytochrome c class III |
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| Protein accession | YP_003197746 |
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| Protein GI | 258405004 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.934871 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAAG GGAAACTTGT TTTCGGCGCG GCCCTCGCCT GTGCCTGCGC GGTACTGCTC
GCCTTCCAAC TCGGGGCTGA AGACAGCCCT GAGGCCGAAG GCCCGCTGAC GCGCAGACCG
GACGTGATCC GCATCGACAC CATGCAGGCT AACGCCACCT TGCAATTGCC TCCGGTGACC
TTCAAACACG ATGCGCACAC CGAGGCGCTG GCTCAAAAAG GCCAACCCGC TGACTGCACC
ACCTGCCACG CATTCGACGA GGGTCAGCTT GATCCGGCCA TGAAAAATGT CGCCGGCAAA
GGGTATGACA CGGCCAAGAA GGTCTTCCAC GACACATGTA TTGGCTGTCA CACCACTCGC
CACGAAGAAA ATCGCTCGAC TGGACCGCTT GATGGGCAAT GCCGTTCCTG CCACGTCGAG
GACCCCCAAA CCGTGGCCCA ACGGCAGGAT GGAGGATTCA AGAAAGTCCT CCACGCCCGT
CACGTCGCCT CTAAGGACAT CGCTTTCAAA GACAAGGACA AAAACTGCGG CAGTTGTCAC
CACAAGTACG ACGAAGCCCA GGACAAACTC ATCTGGGCCG AGGGTGAGGA AGGGACCTGT
CGCTACTGCC ACGGCGAAAC CACTCAGGAC GACGTCCGGG CTTTGCCTGA AGCCGCCCAC
ACCCAATGTC TCTCGTGCCA CCGGTCGCTG ATCGAAAAGG ACAAGGAAAG CGGACCTCTT
TCCTGTCAGG GCTGCCACGG CGAGCAGGGC CGCAAGGAGA TTACGGAGAA TAACGAGAAG
TATCTCGAGA AGCTCTCCGA CGGTCTCCCC CGTCTTGAGC GCGGGCAACC CGATCACACG
CTGCTCTTTG CCGCTTCGAA CGCCACCCAG GCCGAAGGCG ACAATAACGG GGAACTGGCC
ATGAAACCGG TGGCCTTTAA CCACAAGGCC CACGAACAGA AAGCGGATAC CTGCCGCGAA
TGCCACCATG CGGCCATGGA TTCCTGCCAA AGCGAATGCC ACACCTTGAC CGGTGCGAAG
AAAGGCGAGT TTATCCGCCT GGAGCAGGCC ATGCACGAGC CGCAGAGCGA ACGAAGCTGT
GTTGGCTGCC ACGCCCGTGA ACAACAACGT CCGGAATGCG CCGGCTGCCA CGACAATCCG
GTCAAAAAGC CGCAACAAGA CAGTTGCGCA CAATGCCATG CCGCCCCCAC CGGTCCCGAC
GGACAACCGC TGGGCATGAA AGCCCTGGCC GAGATGCCAG ATGAAAAGCT GGAACAAATG
GCCGCTGCCT CATTTGAGGC CCGCCCCAGA GCCGATACCA CCTACGCGGA AAAGGATATA
CCGGAAGAAG TGACCATCAA GGTCATGGCT GATGAATACA AACCGGCCAC GTTTCCGCAC
CGCAAAATCG TGAACAAGCT CATGGAGGGC GTCAAAGACA GCGGGCTTGC CACAGCCATG
CACTCCGGCA AGGACACAAT CTGCAGCAGC TGCCACCACA ACAGCCCGGC GAGCAAAAAA
CCGCCCAAAT GCGCCAGTTG TCACGGCAAG CCGTTCGACC CGAATACCCC GCTGCGGCCC
GGGCTGAAAG CGGCGTACCA CCAACAGTGC ATGGGCTGCC ATACCCGAAT GGAATTGGAA
AAACCTGCGG CCACTGACTG CGCCAGCTGC CATCCCAAAA AAGATGCGCA ATAG
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| Protein sequence | MRKGKLVFGA ALACACAVLL AFQLGAEDSP EAEGPLTRRP DVIRIDTMQA NATLQLPPVT
FKHDAHTEAL AQKGQPADCT TCHAFDEGQL DPAMKNVAGK GYDTAKKVFH DTCIGCHTTR
HEENRSTGPL DGQCRSCHVE DPQTVAQRQD GGFKKVLHAR HVASKDIAFK DKDKNCGSCH
HKYDEAQDKL IWAEGEEGTC RYCHGETTQD DVRALPEAAH TQCLSCHRSL IEKDKESGPL
SCQGCHGEQG RKEITENNEK YLEKLSDGLP RLERGQPDHT LLFAASNATQ AEGDNNGELA
MKPVAFNHKA HEQKADTCRE CHHAAMDSCQ SECHTLTGAK KGEFIRLEQA MHEPQSERSC
VGCHAREQQR PECAGCHDNP VKKPQQDSCA QCHAAPTGPD GQPLGMKALA EMPDEKLEQM
AAASFEARPR ADTTYAEKDI PEEVTIKVMA DEYKPATFPH RKIVNKLMEG VKDSGLATAM
HSGKDTICSS CHHNSPASKK PPKCASCHGK PFDPNTPLRP GLKAAYHQQC MGCHTRMELE
KPAATDCASC HPKKDAQ
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