| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0876 |
|---|
| Symbol | |
|---|
| ID | 8418695 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 1033428 |
|---|
| End bp | 1034486 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 645037445 |
|---|
| Product | 4Fe-4S ferredoxin iron-sulfur binding domain protein |
|---|
| Protein accession | YP_003197745 |
|---|
| Protein GI | 258405003 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTC GTACGTTTTT AAGCTTGCTC GGCGCCGCAG GGACATCCAC CCTGGTGGGC
GGCAATGCCC AGGCTGCCGG CAATCACCAC TTCGAAGGCT ATCCCGACAG CTTCGGGGTC
CTTTTCGACA GTACCCAATG CATCGGCTGC CGCAAATGCG AGGCCGCCTG CAATGAAGTC
AATGAGCTTC CCCAGCCGGA GGTTCCGTTC GACGACCTGT CGGTTCTTGA AACCCAACGC
CGCACCGATG CGGCCAGCTA TACGGTGGTC AACAAATACC ATCCCGAAGA CGCCGCCGAT
CCGGTTTACC GGAAAATGCA ATGCAATCAC TGCCAGGAAC CAGCCTGTGC GTCAGCCTGC
TTCGTCAAGG CCCTGAAAAA GACCGAAACG GGCGCGGTCA TCTATGACGA ATCGGTCTGC
GTCGGCTGCC GGTACTGCAT GATCGCCTGC CCGTTCAACA TCCCGGCCTA CGAATACAAC
AAAGCCTTAG ATCCCGCGGT CATGAAGTGC ACCATGTGCT ACCCCCGGCT TCAAGAGGGC
AAACTGCCTG GGTGCGTCAA GGCCTGCCCC AAGGAGGCCC TGGTCTTTGG CAAGCGGGAG
ACGCTGCTCA AGCTGGCCCG TCTCAAGATC CAGAAATTTC CACAGCGCTA TTTGGACCAC
ATCTACGGCG AAAACGAGAT GGGCGGCACT AACTGGCTGT ACATCACCGG GACGCCGTAT
GAACAAATCG GCATGCGTGA AGACCTTGGA ACCACCCCGG CGCCCAAACT GACTTCCGGC
GCCCTGGCTG CAGTGCCCAT GGTGGTCGGT CTCTGGCCGG TTCTGCTCGG CGGATTGTAC
TACATGAACA AACGCCGGGA CAAAGCTGCC CAGCGCGCCA AGGAAGAGGC TGTCTCCGAG
GCGGTCTCAG TCACCCAAAA CGAGGCCCAG GCGACGCTCA AGCAGGCCAA GGAAAAAGCG
GAAGAAGAAA AACAGGCCGC CATCAAACGG GAAGTGCAAA AAGCGCTGGA CGAAGCGGCA
AAACAGCAAA GCGCAGATAA CGACGACGAG GAGGCCTAA
|
|---|
| Protein sequence | MKRRTFLSLL GAAGTSTLVG GNAQAAGNHH FEGYPDSFGV LFDSTQCIGC RKCEAACNEV
NELPQPEVPF DDLSVLETQR RTDAASYTVV NKYHPEDAAD PVYRKMQCNH CQEPACASAC
FVKALKKTET GAVIYDESVC VGCRYCMIAC PFNIPAYEYN KALDPAVMKC TMCYPRLQEG
KLPGCVKACP KEALVFGKRE TLLKLARLKI QKFPQRYLDH IYGENEMGGT NWLYITGTPY
EQIGMREDLG TTPAPKLTSG ALAAVPMVVG LWPVLLGGLY YMNKRRDKAA QRAKEEAVSE
AVSVTQNEAQ ATLKQAKEKA EEEKQAAIKR EVQKALDEAA KQQSADNDDE EA
|
|---|
| |