| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0833 |
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| Symbol | |
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| ID | 8418651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 985526 |
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| End bp | 987373 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645037401 |
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| Product | indolepyruvate ferredoxin oxidoreductase, alpha subunit |
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| Protein accession | YP_003197702 |
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| Protein GI | 258404960 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | [TIGR03336] indolepyruvate ferredoxin oxidoreductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.187423 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.439959 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACATC CTTTGCTTGC CGATGCCCCG GGAACAACGC ACCTCTTGCT GGGTAACGAG
GCCATAGCCC GCGGCGCCCT CGAGGCCGGT GTTGGTTGTG TGACCTGTTA TCCCGGCACC
CCATCCTCTG AAGTCCCGGA CACTTTGTTC AGGGTCTCTC CAGAGGGGAA CTTCCACTTT
GAATATTCAG TCAACGAAAA AGTGGCCTTG GAAGTCGGCG GAGGGGCTGC CCTGGGAGGC
GTCCCCACTC TGGTGACCAT GAAACATGTC GGGGTCAATG TGGCCGCCGA TCCCTTGATG
ACCCTGGCCT ATATCGGCAC ACCGGGAGGT CTGGTCCTGT TGAGCGCCGA CGACCCGGGC
TGCCACTCCA GCCAGAATGA GCAGGATAAT CGGGCCTACG CCCGGCTGGC CGGGATGCCG
TGCTTTGAAC CGTCAACGGC TCAGGAAGCC AAAGACATGA CCCGTGACGC CCTCCTGCTC
TCGGCCAAAT GGCAGCAGCC TGTTATGCTT CGAACGACCA CCCGGGTGAA CCACCTCCGG
GGCCCTGTGC GCTTCGACGC GTTGCCGCCC GCCAAACGGA CCGGCCAATT TGAAAAAAAT
CCCATGCGCT TTGTGCCCAT TCCAGCTGTG GCTCGGGACA GGCACCCGAA GCTATTGCAC
CAACTCGCCT CCATCGAAGA GGAAATCCAG AATCAAGAGT GGAATACGGT TTCCGGGCAA
GGCCCTGTGG GCATCATCGC CAGCAGCATC TGCCGTGCCT ATGTCCAGGA CGCCTTGCTG
GACATGCCTC AGGCCGACCA GTTCAGCCTG CTGGAACTCA AGGTCAGCTA TCCTCTGCCC
CAGCACCAGC TCCTGGAATT CATTCAGGGA CGTGACAAGG TAGTTGTCGT CGAGGAACTG
GAACCTTTTG TGGAAAGCGC CATTCGGGAA ATGGCCCAAC GCCATCAGCT GGATCTGGAA
ATCATCGGGA AAAGCGAGTT CCTGCCGCGT TGCGGGGAAT TTTCCACCAG GACAGTCGCT
CACGCCCTGG CCCAGGCAGT GGCAGGCACC CCGCCCTCTG CACCGGCCTG CCAAGGCCAG
GAAGGACTTC CCAATCGACC GCCCAACCTG TGCGCCGGGT GTTCCCACCG GGCAACCTAT
TACGCCGTGC GCCAGGTTTT CGGTGACGAG GCTATTTATT CCTCAGATAT CGGCTGCTAC
ACCCTGGGCA TCCTGCCCCC GCTCAAGGCT GCGGACTTTT TGTTCTGCAT GGGATCTTCG
GTTTCCGGAG GGTCCGGCAT GGCCGCGGCC ACGGGGCGGG ACGTTGTCGC TTTCATCGGC
GACTCCACGT TCTTCCACTC CGGCATTACC GGATTGGTCA ATGCGGTCTA TAACGACCAC
GACATCCTGG TTGTGGTCCT CGACAACCGT ACCACAGCCA TGACCGGCCA CCAGCCCCAC
CCAGGGGTTG ACCAGACCGC TCTTGGCGAA AATGCAAACA AAGTGGACAT TGAGCAGATC
GTCCGTGGTT GCGGTGTCAG TCAGATCAAG ACTGTCAAAC CGTTCAACCA CAAGGCCACT
CTTGAGGCAT TGCAGGAACT CAAGGCCATG TCGGGTGTCC GAGTGCTCAT CGCCAAGGAT
CCATGTGCGC TTTTTGCCAA ACGAGTGCTG AAGAAAAAGG CCCCGCAAGT GGCGTATGTA
GCCCAACAGG GTCAGGAAGT GCTCCAGTGC GCCGAACAAG TGGCCTGTCC CGCCTTCACC
ATCTCCGAAG GACAGGTGAC CATCAGCGAA GACCAGTGCA CGGGGTGCAT GCTCTGCGTT
CAGATTTGCC CTGATATCAA AGCTCGGAAA AGGAGCGATA ATGGATAA
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| Protein sequence | MPHPLLADAP GTTHLLLGNE AIARGALEAG VGCVTCYPGT PSSEVPDTLF RVSPEGNFHF
EYSVNEKVAL EVGGGAALGG VPTLVTMKHV GVNVAADPLM TLAYIGTPGG LVLLSADDPG
CHSSQNEQDN RAYARLAGMP CFEPSTAQEA KDMTRDALLL SAKWQQPVML RTTTRVNHLR
GPVRFDALPP AKRTGQFEKN PMRFVPIPAV ARDRHPKLLH QLASIEEEIQ NQEWNTVSGQ
GPVGIIASSI CRAYVQDALL DMPQADQFSL LELKVSYPLP QHQLLEFIQG RDKVVVVEEL
EPFVESAIRE MAQRHQLDLE IIGKSEFLPR CGEFSTRTVA HALAQAVAGT PPSAPACQGQ
EGLPNRPPNL CAGCSHRATY YAVRQVFGDE AIYSSDIGCY TLGILPPLKA ADFLFCMGSS
VSGGSGMAAA TGRDVVAFIG DSTFFHSGIT GLVNAVYNDH DILVVVLDNR TTAMTGHQPH
PGVDQTALGE NANKVDIEQI VRGCGVSQIK TVKPFNHKAT LEALQELKAM SGVRVLIAKD
PCALFAKRVL KKKAPQVAYV AQQGQEVLQC AEQVACPAFT ISEGQVTISE DQCTGCMLCV
QICPDIKARK RSDNG
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