Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0800 |
Symbol | |
ID | 8418618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 947895 |
End bp | 948890 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 645037368 |
Product | TrkA-N domain protein |
Protein accession | YP_003197669 |
Protein GI | 258404927 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.501698 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.632091 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGCGGGG GAGCTCTTAT CCTGGTTTTT GCCTACGGCA TGTTCATCTA TATGGGGCTT GAAGGATGGG GGGCCCTGGA CAGCTTTTAC CAGACAGTGA TCACCCTTTC GACGGTCGGC TTTGAAGAGG TCTATGATCT CTCCCCTCAG GCCAAATTTC ATACATCCAT GCTCATTTTG GCCGGCGTCG GGAGCTTTGC TTATATCGTG GGTTCGTTCA CTCAGATTCT CGTTGAAGGA CAATTACGGA GCTTGTGGGA GAAACGGCGC ATGCAACGAT TCATCGACGC CTTGGAAGAC CATTTCATTG TCTGCGGTTA CGGCCGCATC GGTTCGGTGG TGGCCAAGGA ACTCCATCGT GAAGGGTACG GAGTCGTGGT CATCGATAAC GCCCCTGAGG TTCTCGACGA ATTAGAGCAA TCCGATCTGT TGTTTATAGC CGGAGACGCG ACTTCGGATC AGATTCTGCT TCGCGCGGGG CTCAAACGGG CCAGGGCGAT CATTGCCGCT TTGGATGCGG ATGCTGAAAA TGTCTATGTG ACGCTGACTT CCAAACAAAT GGTTCCCAAG TTGCTGGTTA TTGCTCGGGC GGCTAACGAG CAGTCTATTC AGAAGTTGGA GTATGCCGGA GCAGACAGGG TCTTGACTCC TCACGTGCTG GGAGGCATGC GCATGGCCCA GCTTGTCCTG CGCCCTACTG TGACCGATTT CCTCGATTTG GCCATGCAGG GAAAGCATAT CGATTTGCAG ATGGAGGAGC TGGAAATCAG CCCCGGGTCC TGGCTGGTGG GCAAGGACAT GCTCCATTCC GAGATTCGCC CCCGGTTTAA CCTGATCGTG ATCGCCATCC AGAAACCGGA CGGCTCCATG ATATTCAACC CCCAATCCGA TACTGTCATT GAAGTGCGCG ACACCCTTGT CGTTGTCGGA AACCGAAATG ATCTGGACGC CTTGGAAGAG ATCACCACAG CCTCGCATAC CCTGGACGCC TCGTAG
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Protein sequence | MGGGALILVF AYGMFIYMGL EGWGALDSFY QTVITLSTVG FEEVYDLSPQ AKFHTSMLIL AGVGSFAYIV GSFTQILVEG QLRSLWEKRR MQRFIDALED HFIVCGYGRI GSVVAKELHR EGYGVVVIDN APEVLDELEQ SDLLFIAGDA TSDQILLRAG LKRARAIIAA LDADAENVYV TLTSKQMVPK LLVIARAANE QSIQKLEYAG ADRVLTPHVL GGMRMAQLVL RPTVTDFLDL AMQGKHIDLQ MEELEISPGS WLVGKDMLHS EIRPRFNLIV IAIQKPDGSM IFNPQSDTVI EVRDTLVVVG NRNDLDALEE ITTASHTLDA S
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