Gene Dret_0796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0796 
Symbol 
ID8418614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp942701 
End bp943288 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content54% 
IMG OID645037364 
Productcation antiporter 
Protein accessionYP_003197665 
Protein GI258404923 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1863] Multisubunit Na+/H+ antiporter, MnhE subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATTG TTCCCGAACA ACGCAAACCA GGGGTCGTCC CGGTGGCCGA CCGTACAAAA 
GGAACCTTCA CCGGGCGCCC TCGTGGGCGA GCCCCGTTTC TTTTTACGAG CGCCATTTTA
TTCGTCATCT GGATCATTTT GTCCGGACGA TTTGACTGGC TCCATCTGAC GTACGGACTC
TTGTCCAGCC TCCTGGTGGC CTACTTCTCC AGTGACTTGT TGTTCATCTC CGCCGACCTC
AGTCGAATCC CAGGCCAATG GCTCCGGTTT GTGCTTTATC TGCCCTATTT ATTTAAAGAA
ATTTTCATGG CCAATTTGCA CATGCTCTAT CTGGTCTTTC ATCCCCGGAT GATGGACCTG
ATCGATCCGC AAATCATCAA ATTTCAGGGC AATCTCCAGT CAGATATGTC CGTGGTTACC
CTGGCCAACT CGATCACGCT GACCCCCGGG ACAATCACCA TGAATGTCTC TCCCGTCGGC
GTGTTCACCG TCCACGGCAT TGACCGCAAA TCCGCCTCGG CCCTGCCCGG TGACATGCGC
GACAAAGTCG CCCAAACCTT CGGTGAGTCC GAACCCCTCG AGGAATGA
 
Protein sequence
MAIVPEQRKP GVVPVADRTK GTFTGRPRGR APFLFTSAIL FVIWIILSGR FDWLHLTYGL 
LSSLLVAYFS SDLLFISADL SRIPGQWLRF VLYLPYLFKE IFMANLHMLY LVFHPRMMDL
IDPQIIKFQG NLQSDMSVVT LANSITLTPG TITMNVSPVG VFTVHGIDRK SASALPGDMR
DKVAQTFGES EPLEE