| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0773 |
|---|
| Symbol | |
|---|
| ID | 8418589 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 916970 |
|---|
| End bp | 917728 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 645037340 |
|---|
| Product | phosphoglycerate mutase 1 family |
|---|
| Protein accession | YP_003197643 |
|---|
| Protein GI | 258404901 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0588] Phosphoglycerate mutase 1 |
|---|
| TIGRFAM ID | [TIGR01258] phosphoglycerate mutase, BPG-dependent, family 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.9005 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCGAA TCGTTTTGGT TCGCCACGGT CAGAGCACTT GGAATAAGGA GAATAAATTT
ACCGGTTGGA CGGATGTTCC GCTGAGCCCT GCAGGCGAAA AGGAGGCCCT TCGGGCGGCG
GGGCAACTCC TTGCGGCCGG ACTGGATTTC GATATCTGCT ATACCTCTTT TTTGAAGCGG
GCTATCAAGA CGTTGTGGTT GATCCAGGAA GCCATGGATC GCATGTGGTT GCCGGTGGTC
AAGCAGTGGT GTTTGAACGA ACGCCATTAT GGGGCGTTGC AGGGATTGGA CAAAGGACAA
ACCGCTGCGC AGTACGGCGA GGAGCAAGTA TTCCAGTGGC GGCGGGGCTA TGCGGTCCGC
CCGCCAGCAC TGCCGGAAGG AGATCCCCGA TTGCCGGAAC ACGACCCGCG CTATTCGAGG
CTCCAGCAGG CTGGACGTCC CCGGACAGAG AGTCTGGCAG ATACCGTGGC CAGGGTCCTA
CCGTATTGGA ATCGAGAAAT CGTGCCCCGG ATCCAGGAAA ATCGCCGAGT TCTTCTTGTG
GCGCATGGGA ACAGCCTGCG GGCACTGGTG AAACATTTGG AGGGCGTGAG TGACGAGGCC
ATCACCGGGC TCAATATCCC TACTGGCATC CCGCTGGTCT ATGAACTCGG TCCGGACATG
AAGGCGATTG GCTCCTATTA TCTGGGCGAT GCGGAGGAAG CGGCAACCGC CGCGGCTGAG
GTGCAAGATC AGGGGACGGC TTCCCGATCG TTTGGCTGA
|
|---|
| Protein sequence | MFRIVLVRHG QSTWNKENKF TGWTDVPLSP AGEKEALRAA GQLLAAGLDF DICYTSFLKR
AIKTLWLIQE AMDRMWLPVV KQWCLNERHY GALQGLDKGQ TAAQYGEEQV FQWRRGYAVR
PPALPEGDPR LPEHDPRYSR LQQAGRPRTE SLADTVARVL PYWNREIVPR IQENRRVLLV
AHGNSLRALV KHLEGVSDEA ITGLNIPTGI PLVYELGPDM KAIGSYYLGD AEEAATAAAE
VQDQGTASRS FG
|
|---|
| |