| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0701 |
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| Symbol | |
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| ID | 8418514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 834655 |
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| End bp | 836013 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645037265 |
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| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
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| Protein accession | YP_003197571 |
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| Protein GI | 258404829 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.390786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0731978 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAGCA TACATATCCT TTTTCTTAGC GCAAAAGCAA CAACCGACAG GGAACTCGAA
TCCCTTTTGG AGCAAGACGG GTATGCGGTA ACCACGACCC GGGACTTCGA AAGCCTGGAA
CGGCATCTCG ACGGTCGCGA CTTTGACCTG GTCATTCTCT GCCTCCCTCT GGCCCCGGAC
CAGGAACTCA ACCTCCTGGA AAAAATCAAG AGCCACTCCC CCTTGACCGA GGTTATCCTG
ATCACCAGCA CCCCCAACGT CGAGGGGGCG GTGGCCTCCA TGAAAAAAGG GGCGTTCCAT
TACATGGCCC AGCCCTATAA ACCCAATGAA GTCCGGCTGC TGACCTCCAA TGCCCTGGAA
AAACGGTTGT TGCGCCTTGA GGTCCAGGAA TTGCGCAGCA TGGTCCGTAA CAAGGAATCG
CTGCCCAACC TGATCGGCAA AAACCCGCGG ATGCAGAACC TGAAGCGCGA AATCGCCCGG
GTGGCCCCGC TTGACTGTAA CGTGCTCATC CTGGGGGAAA CCGGTACGGG CAAGGAATTG
GTGGCCAAGA CCATCCACAA TATGAGTATG CGGGCCGACC AAAAATTTTT GGCTGTAAAC
TGCGGGGCCC TGAACGAGGA ATTGCTCGGC AACGAATTGT TCGGACACGA AAAGGAGGCC
TTCACCGGTG CCCAACGGGT TAAAAAGGGA GTCTTCGAAG CCCTCGCCGG CGGAACTTTG
CTTTTGGACG AAATCGGCGA CATGCCGCTG GCCATGCAGG TCCAACTCCT GCGCGTGCTG
CAGGAAAAAA GCATCATGCG TATCGGAGGC ACCCGGGAGA TCCCTGTTGA CACCCGGGTG
CTGGCCGCCA CCAACCGTCC CTTGCAGGAG GACGTTCAAG CCGGAGGCTT TCGCCAGGAT
CTTTATTACC GCCTCAACGT CTTCACCCTG CGCATCCCGC CGCTACGGGA ACGTGCCGAC
GACATCCCGC TTTTTTGCCG CTACTTTCTG GAAAAATACA CGCTGGAGTT CAATAAAACC
ATCGAACGGT TCTCGGACGA AGTTGTCGAG ATCCTCCAGC ATTATCAATT TCCGGGCAAT
GTGCGTGAAC TGGAAAACAT CATCGAACGG GCCATCGTCC TCTGCGACGG ACCGGTCCTC
GAACGGCGCC ATCTGCCCCG CCGCCTCAGG AGCCCCCGGG CCTTGCAATA CGAGACCAAA
ACCCGGGACC ATCTCCTGCC GTTGGCGGAA TTGGAACGGC AATATATCGA GGACGTGCTG
AGTATTGTCG GGGGCAACAA GAAAAAAGCG GCCGAAGTCT TAGGCATCGA TCGCACCACC
CTGTGGCGCA AACTCAAAAA TCAGAACGAG ACTTCCTGA
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| Protein sequence | MQSIHILFLS AKATTDRELE SLLEQDGYAV TTTRDFESLE RHLDGRDFDL VILCLPLAPD
QELNLLEKIK SHSPLTEVIL ITSTPNVEGA VASMKKGAFH YMAQPYKPNE VRLLTSNALE
KRLLRLEVQE LRSMVRNKES LPNLIGKNPR MQNLKREIAR VAPLDCNVLI LGETGTGKEL
VAKTIHNMSM RADQKFLAVN CGALNEELLG NELFGHEKEA FTGAQRVKKG VFEALAGGTL
LLDEIGDMPL AMQVQLLRVL QEKSIMRIGG TREIPVDTRV LAATNRPLQE DVQAGGFRQD
LYYRLNVFTL RIPPLRERAD DIPLFCRYFL EKYTLEFNKT IERFSDEVVE ILQHYQFPGN
VRELENIIER AIVLCDGPVL ERRHLPRRLR SPRALQYETK TRDHLLPLAE LERQYIEDVL
SIVGGNKKKA AEVLGIDRTT LWRKLKNQNE TS
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