Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0686 |
Symbol | |
ID | 8418499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 816101 |
End bp | 816712 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645037250 |
Product | phosphoheptose isomerase |
Protein accession | YP_003197556 |
Protein GI | 258404814 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0279] Phosphoheptose isomerase |
TIGRFAM ID | [TIGR00441] phosphoheptose isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.111927 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.369891 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAAA GCGCCCATGA CATAGTAGCT GATTACGCCC GCGAGGGGCT GGCGCTCAGG GAGCGTTTTT TTACCAGCAA CGCGGAAGCG ATCGCAGCGC TTGGATTGAA TATAGCCGTT TGTCTGGCCA AAGGCGGCAA AATTTTGTTG TGCGGCAATG GCGGAAGTGC GGCGGACGCG CAGCATCTGG CAGCAGAATT CGTCAACCGG TTCCAGATCG AGCGACCGCC GCTGCCCGCT ATTGCTTTGA CCACGGACAG TTCCATTCTC ACGGCCATCG GGAACGACAG CAGTTTTGAC GAGGTCTTTG TTAAGCAAGT CAAGGCCCTG GGTCGTCCTG GAGATGTCCT GCTCGGGATT TCCACGTCGG GCAAGAGTGC CAATGTCAAT GCGGCATTGG CCGCGGCCCG GGAAGGCCAA TTGGGCACGG TGGGCTTAGC GGGCAAGGAC GGCGGGGCGA TGGCCGATCT CTGCGACACC TTGTTGGTCG TGGATCACGA CAGCACGCCG CTGATTCAAG AAGTCCAGAT CGCCGTGGGC CATATGGTCT GCCGACTGGT GGACTACTAC CTGTTTGAGG CCGTGGTGGA ATTGCAGCCG TATCTCGAAT AA
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Protein sequence | MTQSAHDIVA DYAREGLALR ERFFTSNAEA IAALGLNIAV CLAKGGKILL CGNGGSAADA QHLAAEFVNR FQIERPPLPA IALTTDSSIL TAIGNDSSFD EVFVKQVKAL GRPGDVLLGI STSGKSANVN AALAAAREGQ LGTVGLAGKD GGAMADLCDT LLVVDHDSTP LIQEVQIAVG HMVCRLVDYY LFEAVVELQP YLE
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