| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0621 |
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| Symbol | |
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| ID | 8418433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 745346 |
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| End bp | 747073 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645037189 |
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| Product | transposase IS4 family protein |
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| Protein accession | YP_003197496 |
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| Protein GI | 258404754 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG5421] Transposase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00154214 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000449276 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCACACC TGCATAAAAA AGTTAAACAG GGCAAGCCTT ACTACTATAT CCGGGAGATG
GCCCGGGTGA ACGGGAAGCC CAAAGTCGTT AACCAGATCT ATCTGGGGTC TGTTGAGCGC
ATCATGGAAA TGGCCATGGG CCAGGAAAAA GCTGACCTGA GCAGAATCCA AGTCCAGGAG
TTCGGTTCTC TTTTTCTGGC TAACCTCATG GAAAAACAAA TTGGGATCGT GGAGATTATC
GATTCAGTCA TCCCGCCAGA TCCCAGGGAT TCAGGTCCGA GTTTGGGAGA ATTTTTTCTG
TATGCGGCCT TTAACCGTAT GATCGACCCT TGCTCCAAGC ATAGCCTTTC GGATTGGTTG
AAAGATTTCG CTGTCCATCA GATTCGACCC GTGGATACCA GTGCCTTGAC TTCTCAGCGA
TATTGGAAGC GTTGGGAGCG TGTTGATCAG GAGTCTATTG AAGATATTTC CAAAGCTTTA
TTCAAAAAAG TTAGTGAATT AGATCCCATT AAATCGGATT GTTTTCTTTT CGATACCACC
AACTACTTCA ACTACATGGA CAGCAAGACT TCGTCCCAGC TAGCCCAGCG GGGGCGGAAC
AAAGACGGCA AAAATTGGCT CCGACAGGTC GGCTTGGCGT TGCTTGTCTC AAGGGGCTCG
CAGTTGCCTC TTTTTTATAA AGAATACGAG GGCAACTGCC ACGACTCCAA GCTGTTTAAC
CGGCTACTGG GAAACATTTT CGCCTCCTTG GAGGACCTGG GCCGAGGAAC CGATTCGTTG
ACCGTGGTCG TCGACAAGGG GATGAATTCC GAGGCGAATA TGCAGGCTAT CGACAAACAA
GCGAAAGTGG ACTTTGTGAC CACCTATTCT CCTGCCTTCG CTGAGGATTT AGCCCAAACC
GACCTGGAAA ATTTTGCTCC TGTTGATACC CGGAAAAACC GCGAACTCGC TGCAAGGGGT
CGCCAAGACG ATCAGATGGT GGCTTGGCGA ACCACTGGGT TCTTCTGGGG CGCCACCCGA
ACAGTGGTGG TTACCTACAA CCCCAGGACA GCGGCAAAAC AGCGGTATCG CTTCGATCAA
AAACTCGGCA AGCTCCAAAA TGGTCTTTTC GAGCTACGCG CTCGAGTCCG GGCAGGCAAT
AAGGCCTTGA AAAGCAAAGA GCAGGTTAAA GCCAGGTACA AAGACCTTTG CGAATCGCTA
TATCTTCCCA AGAATCTTTA CAAAATCGAA TTTGTGACCA CTGGCAAACA GCTGAAAATG
TATTTTCGCA AGGATCACTA TCAAATCAGC AAACATGTCA AACGCTTCGG GAAAAATATC
ATCATTACGT CACATGATGA CTGGGATAAA GAGGCCATTG TACAGGCCAG CCTGGATCGT
TACCAAGTCG AAAATGCCTT TCGCCAATCC AAGGGCAATG AATTCGGAAA TTTTCGTCCC
GTATGGCATT GGACGGATGG CAAGATCCGT TGCCACTTGT TCGCCTGCCT TATCGCACAG
ACCTATTTGC AGTTGATCGC CTTGCACCTG AAAAAAGCTG GACTGAATTA TTCCGTAGAT
CAAGCAATGA AATCAATGCG CAATCTTTCC AGCTGCTTAT GCTGGAGCAA GGGCAAGCGG
AAGCCAACTC GAATCATTGA AGAACCCAGT GAGGAGCAAG CGGCGATATT GAAGTCTTTT
GGCTACAAAA TTCGCAATGG GGTCTTAGAG CGCCGGTCAC ACCGGTAA
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| Protein sequence | MAHLHKKVKQ GKPYYYIREM ARVNGKPKVV NQIYLGSVER IMEMAMGQEK ADLSRIQVQE
FGSLFLANLM EKQIGIVEII DSVIPPDPRD SGPSLGEFFL YAAFNRMIDP CSKHSLSDWL
KDFAVHQIRP VDTSALTSQR YWKRWERVDQ ESIEDISKAL FKKVSELDPI KSDCFLFDTT
NYFNYMDSKT SSQLAQRGRN KDGKNWLRQV GLALLVSRGS QLPLFYKEYE GNCHDSKLFN
RLLGNIFASL EDLGRGTDSL TVVVDKGMNS EANMQAIDKQ AKVDFVTTYS PAFAEDLAQT
DLENFAPVDT RKNRELAARG RQDDQMVAWR TTGFFWGATR TVVVTYNPRT AAKQRYRFDQ
KLGKLQNGLF ELRARVRAGN KALKSKEQVK ARYKDLCESL YLPKNLYKIE FVTTGKQLKM
YFRKDHYQIS KHVKRFGKNI IITSHDDWDK EAIVQASLDR YQVENAFRQS KGNEFGNFRP
VWHWTDGKIR CHLFACLIAQ TYLQLIALHL KKAGLNYSVD QAMKSMRNLS SCLCWSKGKR
KPTRIIEEPS EEQAAILKSF GYKIRNGVLE RRSHR
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