Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0588 |
Symbol | flhA |
ID | 8418400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 709577 |
End bp | 711664 |
Gene Length | 2088 bp |
Protein Length | 695 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 645037156 |
Product | flagellar biosynthesis protein FlhA |
Protein accession | YP_003197463 |
Protein GI | 258404721 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1298] Flagellar biosynthesis pathway, component FlhA |
TIGRFAM ID | [TIGR01398] flagellar biosynthesis protein FlhA [TIGR01399] type III secretion protein, HrcV family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAGAGG CGCTTCGGCA CAATAAATGG GTGGAGATTC TGCTACGCAG CGATATTATG GTCGCCTTAG GTTTGGTGAC CATTTTGATG CTCATGATCA TCCCCCTGCC GCCGATGCTG TTGGACCTCT TTTTGTCACT GAATATCACC GCCGGCCTGT TGATCCTGAT TATCACCCTC TACACCCACC GTTCCCTGGA ATTTGCCATA TTCCCCACGG TGTTGCTTGC CACAACGTTG TTTCGCCTGT CTCTGAACGT GGCCTCGACC AGACTCATCC TTCTCTATGG GGACACCGGC CCCTATGCCG CAGGCAAAGT CATCTATTCC TTTGGCCAGT TTGTGGTTGG TGGCAATTAT GTTGTCGGAA TCGTCGTGTT TATGATTTTG GTGGTTATCA ATTTTATCGT TATCACCAAG GGGGCGGGCC GGGTGGCTGA GGTGTCGGCC CGGTTCACCC TGGATGCTAT GCCTGGGAAG CAGATGGCCA TCGACGCCGA TCTCAATGCC GGACTGATCG ATGAGAACGA GGCCCGTCGT CGTCGAGAGG ATATCGCGCA GGAGGCAGAT TTTTTCGGAG CCATGGATGG GGCGAGCAAG TTCGTCCGTG GCGATGCCAT CGCCGGGATT ATTATTACCA TGGTCAACAT CGTGGCCGGG TTCATTATTG GCGTGGCCCA GAAAGGCATG CCCATGATGG AGGCGGCCCA GAACTACACC ACCCTGACTG TAGGCGATGG TCTAGTTAGT CAGATTCCGG CGCTTATCAT TTCTACTGCA GCAGGCATCC TGGTTTCTCG GGCTGGTGGC ACTGGGGATC TTGGCTCGGC ACTGTCCAAA CAGATCACGT TCAACCCCCG AGCGATCTGG GTTGTTGCTG GCATCCTGTT GCTGTTCGCC CTTATTCCGG GGCTGCCCTT TGTGCCCTTT TTGATTTTGA GTGGGCTTTT GGCCTTTTTG GGCTATACCC TCCATAAACA GGCGCTGCAG GCTGAGGCGT TGGAAGCAGC TGCCGAGCCA GAGGCGCCAG CGGTGGAGCA AGAGGAAAAC TACGAGAACA TGCTTCAGGT GGAAATGTTG GAATTGGAGA TCGGTTACGG GGTCATCCCC TTAGTCGACG CGAGTCAGGG CGGCGAAATG TTGGAACGTA TCAAGTCTAT CCGTAAGCAG TTTGTGCTCT CGCATGGATT CATCGTGCCG CCCATTCATA TCAAGGACAA TTTGCAACTG AAACCCAATG AATATGTGCT CAACCTTAAA GGCGAACAGG TAGCCCGGGG GGAGGTCTAT CCCCGGCAAT TCATGGCTAT GGATCCGGGC ACGGCCACGG AGAAGATCCA GGGCACGCAG ACCACAGAAC CCGCCTTCGG CCTTCCGGCG ACTTGGATCA GCGAAGACAA GCGTGAACGC GCCCAAGTGG CTGGATACAC TGTGGTTGAC TGCCCAACGG TCATGGCTAC TCACGTTAGC GAGGTCATCA AGGCCTATGC CCACGAGCTG ATTGGGCGGC AAGAGGTACA GAATTTGCTA GATACTGTTG CCAAGGACTA TCCCAAACTT GTGGAGGAGT TGGTGCCGAA TCTCCTCAGT TTGGGTGGGG TCCTGAGGGT AATGCAGAAC TTGCTCAAAG AAGACGTTTC CATCAGGGAT TTGCGAACTA TTCTGGAAAC TTTGGCTGAT CACGCCGGAC ATACTCAAGA TCTGGATCAA TTGACCGAAT TTGTTCGTCA AGCCCTGGCC CGTCACATCA GTAGCAAATT TGCCCAGCCA GATAATACCA TCCCGGTGCT CACATTGGGC CAGGATATTG AAGAAACGGT GCGCCAATCC GTGCAGCAGA CCGGGCAAGG TCCGGTTTTG GCCTTGGATC CGCAAAAGGC ACAGAGCATC ATTCAGCAGG TGAGTGAACA TTTACAAAAA GTGGGGCAGG GCGCTCCGGT GGTCCTGCTC TGTCCGTCAA ATATCCGACT GTATGTCCGT AAGTTGACGG AACGGTATTT GCCCCGGCTC GCGGTTTTGA GCCACGCCGA GATCTCACCG GACATGAAGG TCCGATCAGT AGGAACGGTC AGCTTGTATG CAAATTAA
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Protein sequence | MIEALRHNKW VEILLRSDIM VALGLVTILM LMIIPLPPML LDLFLSLNIT AGLLILIITL YTHRSLEFAI FPTVLLATTL FRLSLNVAST RLILLYGDTG PYAAGKVIYS FGQFVVGGNY VVGIVVFMIL VVINFIVITK GAGRVAEVSA RFTLDAMPGK QMAIDADLNA GLIDENEARR RREDIAQEAD FFGAMDGASK FVRGDAIAGI IITMVNIVAG FIIGVAQKGM PMMEAAQNYT TLTVGDGLVS QIPALIISTA AGILVSRAGG TGDLGSALSK QITFNPRAIW VVAGILLLFA LIPGLPFVPF LILSGLLAFL GYTLHKQALQ AEALEAAAEP EAPAVEQEEN YENMLQVEML ELEIGYGVIP LVDASQGGEM LERIKSIRKQ FVLSHGFIVP PIHIKDNLQL KPNEYVLNLK GEQVARGEVY PRQFMAMDPG TATEKIQGTQ TTEPAFGLPA TWISEDKRER AQVAGYTVVD CPTVMATHVS EVIKAYAHEL IGRQEVQNLL DTVAKDYPKL VEELVPNLLS LGGVLRVMQN LLKEDVSIRD LRTILETLAD HAGHTQDLDQ LTEFVRQALA RHISSKFAQP DNTIPVLTLG QDIEETVRQS VQQTGQGPVL ALDPQKAQSI IQQVSEHLQK VGQGAPVVLL CPSNIRLYVR KLTERYLPRL AVLSHAEISP DMKVRSVGTV SLYAN
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