Gene Dret_0580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0580 
Symbol 
ID8418392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp704316 
End bp704825 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content49% 
IMG OID645037148 
Productflagellar basal body-associated protein FliL 
Protein accessionYP_003197455 
Protein GI258404713 
COG category[N] Cell motility 
COG ID[COG1580] Flagellar basal body-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAAA AAGATGAGAA CGCTGCAAAA CAGGGTGCAA AAGGCGATCG AAAGTTCAAG 
CTTTTGCTGA TTGTGGCCAG TGTTTTCCTG CTCGCAGCTA TAGGGGCGGG AGGCTATTAC
ATCGGCACCC AATGGGGAAG TGAGAGTGAA GCGGCACAGG AAAACACTCC TTCTTCCGAA
AGCGTTTCGT TTGACAGCAA GGGAGAACTT GGCCCCCTTG TGGAAATGGA TGACTTCTTA
GTCAATATCG CTGATGGAGA GCAGACTCGA TATCTGAAGG CGAGCATTAC AGTGGAGGCG
ACAGACAAGA AGAGTCAGGA CGAGCTCAAT AAACGTATTC CTCAGATCCG CGATGTGATC
ATTTTTCACC TGGGGACGAA AACCTTTGAT CAAGTTCGTG ACTTGCAGGG CAAGAAACAA
TTGCGGGCAG AATTGACCAA GCGACTGAAC GGTATTGTCG ACCAGCGGCT TGTGCAACGC
ATTTTTTTCA CGGAATTTGT GGTCCAATAG
 
Protein sequence
MAKKDENAAK QGAKGDRKFK LLLIVASVFL LAAIGAGGYY IGTQWGSESE AAQENTPSSE 
SVSFDSKGEL GPLVEMDDFL VNIADGEQTR YLKASITVEA TDKKSQDELN KRIPQIRDVI
IFHLGTKTFD QVRDLQGKKQ LRAELTKRLN GIVDQRLVQR IFFTEFVVQ