Gene Dret_0570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0570 
Symbol 
ID8418382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp694399 
End bp695430 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content51% 
IMG OID645037138 
Productflagellar motor switch protein FliG 
Protein accessionYP_003197445 
Protein GI258404703 
COG category[N] Cell motility 
COG ID[COG1536] Flagellar motor switch protein 
TIGRFAM ID[TIGR00207] flagellar motor switch protein FliG 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACAA AACGCATGAG TAAACGCGAT TTTGATAACC TGTCCGGGGT AGAAAAGACT 
GCAGTTCTCC TGCTTTGTCT GGGTGAGAAA ACCACCGCGG AAGTATTCAA AGAACTGTCC
GATACCGAAG TGCGGCTCAT TAGCCGAAGC ATGATGCAGA TCGATCATGT GCCGGCGGAC
ATGGCCCGCA AAGTCCTGGA CCGCTATAAG GAGTCCATGC AGGAATACGC CGGTTTTTTT
GTGGACGGCG GGGATTTCAT GCAAAAGGCG ATTTACGGAA CCGGGGATCC AGAACGTGTG
GACGGCCTTC TGGAAGAGGT TATGCTCGGT TCGGAGGACA GGCCTTTGGA GACTATAGCC
ATGATGGATC CACGCACCAT CGCCAGTTTG TTGGAAAACG AACACCCGCA GACCATAGCT
CTGATCCTTT CGACCCAGAA GGCGGACCAG ACCGGAGCCA TTTTATCTTT TTTTTCTGAG
ATGATGCGGG CTGATGTTGT CTACCGTATT GCCAAGATCG ACAAGGTCTC TCCGGATGTG
CTCTCGCATA TTGAAGAGGC CTTGCAGCGG GAGATCGGTG GTGTGGTGAA TAAAGAGCAG
CAGCAAGTCG GCGGTGTCGA CAAGGTTGTG GACATATTGT CTCAAATCGA TAAGGGCGGG
GATTTTAAAA TTCTGGAAAA GATTGAGTCT CAGGATCCGG ATATGGCTGA GGAGATCCGT
AAGAAAATGT TCACTTTTGA GGATCTGGAA TCCATCGACA ATCGCGGGAT GCAACTCATC
CTCCGTGAAG TTCGTAATGA AACACTGACC TTGGCGTTGA AGACCGCTTC GCCGCGAATC
CAAGATAAGA TTTACAACAA TATCAGTGAA CGCGCCAAGG AAATGATCCA GGACGACTTA
GAAAGCATGG GGCCTGTACG CCTCTCCGAG GTGGAGTCGG CCCAGCAGAG CATTGTCCAG
CAGGCTCTGC GTTTGGAAGA GGAAGGGCGT TTAGTTATCC CCGGACGCGG AGGTCAGGAA
GTCCTTGTCT AG
 
Protein sequence
MATKRMSKRD FDNLSGVEKT AVLLLCLGEK TTAEVFKELS DTEVRLISRS MMQIDHVPAD 
MARKVLDRYK ESMQEYAGFF VDGGDFMQKA IYGTGDPERV DGLLEEVMLG SEDRPLETIA
MMDPRTIASL LENEHPQTIA LILSTQKADQ TGAILSFFSE MMRADVVYRI AKIDKVSPDV
LSHIEEALQR EIGGVVNKEQ QQVGGVDKVV DILSQIDKGG DFKILEKIES QDPDMAEEIR
KKMFTFEDLE SIDNRGMQLI LREVRNETLT LALKTASPRI QDKIYNNISE RAKEMIQDDL
ESMGPVRLSE VESAQQSIVQ QALRLEEEGR LVIPGRGGQE VLV