| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0557 |
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| Symbol | |
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| ID | 8418369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 669390 |
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| End bp | 670364 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 645037125 |
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| Product | Extracellular solute-binding protein |
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| Protein accession | YP_003197432 |
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| Protein GI | 258404690 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCGGA AATTGATCTG TTTTCTCGGA ATCAGCCTCG CGTTAGCCGC CCCAGCGTAT
GGCGCCGCCA TGAAAATGAA TTGCAATGCT ATTTATCCAG CGTCGAATTT CCACACCCAA
GGTGCTGAGC ATTTCGCCGA ATTGGTCCAC AAATATACTG ACGGCGATAT CCAGATCACG
GTCCACTCCG GCGGGAGTCT GGGGTTTGAA GGCAGCGAAC TGCTCAAAGC TGTCAAGGAC
GCCTCCGTGC CCATGTCGGA TATCCTGATG GGCGTGGTTG CCGGCAGTGA AGAAATTTTC
GGTTTGAGCA CATACCCGCG GATCGTCAGT TCGTATGCCG AGGCACGGGA ATTGTATGAG
GCTGCATTGC CTGCGTACAA AAAAGCCTGC CAAAAATGGA ACCAAAAATT CCTGTACGCC
GCTCCGTGGC CGCCCAGCGG TCTTTTCAGC CAGTCCAAGG TTCAATCCGC TGCGGATATC
GATGGACTCA AGACCAGGAC CTACGACAAG AATGGAGCGC AATTCTTGAA GAAGCTTGGC
GGCAACCCGG TGTCCATGCC CTGGGGCGAG GTGCCGTCGG CTCTGAATAC CGGTCTGATC
GATTCCGTTT TGACCTCGGC TACCTCCGGC AAGGACGGCA AGTTCTGGGA AGTCCTGGAC
CATTTCACCG CGCTGCATTT CGCGTATCCG CTCAATATGC TGACCATCAA TATGGACTAT
TGGAACGCCT TGTCCGCTGA ACAGCAGTCG GCGTTGGAAA AAGCGGCCGC AGAGACCGAG
TCCTTCCAGT GGGAAGCTTC GAAAAAGAGC AATCGTGACT CGTTGAAGGT CTTGGAGGAC
AACGGCCTGC GAATCACTGA GGTGGATGCG GCTCTGGCCG AAAAATTGGA CGCGGCTGCC
GCGGACATTT TTGAGGAATT CAAAGCCGAG GCGGACGAAG ATACCAAAAA GGCCCTTCAG
GCCATCGGGA TGTAA
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| Protein sequence | MLRKLICFLG ISLALAAPAY GAAMKMNCNA IYPASNFHTQ GAEHFAELVH KYTDGDIQIT
VHSGGSLGFE GSELLKAVKD ASVPMSDILM GVVAGSEEIF GLSTYPRIVS SYAEARELYE
AALPAYKKAC QKWNQKFLYA APWPPSGLFS QSKVQSAADI DGLKTRTYDK NGAQFLKKLG
GNPVSMPWGE VPSALNTGLI DSVLTSATSG KDGKFWEVLD HFTALHFAYP LNMLTINMDY
WNALSAEQQS ALEKAAAETE SFQWEASKKS NRDSLKVLED NGLRITEVDA ALAEKLDAAA
ADIFEEFKAE ADEDTKKALQ AIGM
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