Gene Dret_0458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0458 
Symbol 
ID8418264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp561429 
End bp562427 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content60% 
IMG OID645037020 
ProductRadical SAM domain protein 
Protein accessionYP_003197333 
Protein GI258404591 
COG category[C] Energy production and conversion 
COG ID[COG0731] Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCAAAA CGAGTCAAGC ACAACCCGCC CCCCCGTCCT ACCGTTACCT CTTTGGTCCG 
GTGGCTTCGA GTCGTCTCGG CCGCTCCCTG GGACTCGACC TCCTCGGCGG ACCGATCTGC
AGCTTTGACT GCGTGTATTG CGAAGTAGGG CGCACCAAGC TCCACACCTG TCAGCGACGG
GCGCATGTCC CCGCATCGCG ACTCGTGCAG GAACTGCGGC AGTGGTTCAA GGAGGGGCAC
CAGCCGCCGG ATTACATCAC CCTCGGCGGG CAGGGGGAAC CGACCCTGAA CAGCGAACTG
GGTACGCTGG TCCACCAGGT GCGGCAGCAG TGGCCGACTA TTCCAATTGC CGTCCTGACC
AATTCCTCCC TGTTGCACCG CGAGGACGTC CAGGAGGAAC TGGCAGAAGT CGACACGGTG
CTGCCGTCGC TGGACACCCT TGTCGATACG GAATTTCACC ATCTCAACCG GCCTTGCACC
GGGGTCGACC TGAGTCGCAT CAGCCAAGGG CTCTTGGAAT TCCGTCGCCG CTACAGCGGC
AAAATCTTTC TTGAAATTCT TCTGGTCCAT GGCATAAACG ACACTGCAGA AAATAAAAAT
CGATTACGGG AATTTATTGC AGAATTTTCC CCGCAGCGTG TAGATGTCGT TACCATGACA
CGGCCCGGCG CCTTCAGTGA GGCCCGGCCG ATCCCCAATT CAATACTTCG TTCCTGGCGC
GAGGCACTTG GTGCCTGCCA AGATCCCGTG GCGCGGTCAT CCGCACCCGA AACACACACC
ACCTCACCGG TACACCTGGA CGGGCAAGCC ATTGCGGCCA CAATCACCAA CTCATTGGCC
AGACGACCGC AAACTGTGGA CCAGCTGGCT TTTGCCTTGA ATTTTGCCCG TTCCGACGTC
GCCGCGACCC TGGATGCCCT TCAAAACCAG GGGACTGTCG TGGTTCTCAC GGGAACGGAT
GTCCCGTATT ACGGGCTCGC GTCAAGCGAA CGCAACTAG
 
Protein sequence
MPKTSQAQPA PPSYRYLFGP VASSRLGRSL GLDLLGGPIC SFDCVYCEVG RTKLHTCQRR 
AHVPASRLVQ ELRQWFKEGH QPPDYITLGG QGEPTLNSEL GTLVHQVRQQ WPTIPIAVLT
NSSLLHREDV QEELAEVDTV LPSLDTLVDT EFHHLNRPCT GVDLSRISQG LLEFRRRYSG
KIFLEILLVH GINDTAENKN RLREFIAEFS PQRVDVVTMT RPGAFSEARP IPNSILRSWR
EALGACQDPV ARSSAPETHT TSPVHLDGQA IAATITNSLA RRPQTVDQLA FALNFARSDV
AATLDALQNQ GTVVVLTGTD VPYYGLASSE RN