| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0424 |
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| Symbol | |
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| ID | 8418229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 520956 |
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| End bp | 522377 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645036985 |
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| Product | putative two component, sigma54 specific, transcriptional regulator, Fis family |
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| Protein accession | YP_003197299 |
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| Protein GI | 258404557 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.249204 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCCAGA TCCTGATTGT TGATGACGAC CGGTTTTTGT GTCGCAGCCT GTGCCTTGTT
CTCGAAGGGA TGGGGCATAC CGTCATGTGC GCCTCCACTC TGGGCGAAGG GCGGCGGTTG
CAACAGGAAT ACGACTATGC AGTGGTCATC CTCGATGTCT GGCTGCCTGA CGGCAATGGC
CTGGAGGCGC TGCAGGGGTT TCGCACCGAC CGGGTGCCGC CTGAAATCAT TATTCTGACC
GGTGCCGGTG ATCCGGACGG GGCGGAGTTG GCTATCCGCA GCGGGGCGTG GAGTTATATC
ACCAAGCCGC CCACCTTGAA CAAATTCCGT TTGCCGGTGC AGCGGGCCGT GGAGAGCTTC
GAGAGGCGGC AAAAAATGCC CGCCTTTTCC CTGCGACGCG AGGGCATTGT TGGAGAAAGT
TCGCTCCTCG TGCAGTGTCT GGACGTGATC GCCATGAGCG CGAATACCGA GTCTCCGGTG
CTTATTGCCG GGGAGACCGG AACTGGCAAG GAATTGTTCG CTCGGGCCAT CCACGTCAAC
AGCAACCGCG CTGAAGGCCC TTTTGTCGTC GTCGATTGTG GAGCGTTGAC CGAGAATCTG
GTGGAGAGCA CCTTGTTTGG TCACGAACGC GGAGCGTTTA CCGGCGCCGA TAAAGCCCAG
AAGGGATTGA TCCAGGTGGC TCATGGCGGG ACGCTGTTCC TTGATGAGGT GGGAGAACTG
CCGCTTGGTA TCCAGAAGAC ATTCCTGCGT GTGTTGCAGG AAAAGCGGTT TCGTCCGGTG
GGCGGCACCC GGGAGGCGCA GAGCGATTTC CGGCTTGTTG CAGCCACCAA CCGCGACCTC
GATCAGCTTG TGACGGCGGG GGGGTTCCGC CAGGACCTCG TCTACCGCTT GAAATCCATC
CAGGTCGATC TGCCGCCACT GCGCCGGATC AAGGGCGATA TCGAGATGTT GTGCTGTCAT
TATGTAGCGA AATACTGCAA TAGAATGGGC ATCAGCAAAA AGGGGTACAG CGCCGAGTTT
CTCGATGCCC TGCTGCAGTA CGAATGGCCG GGAAATGTCC GGGAACTGGT CAATTGCGTG
GCCCACTGCC TGTCTTCGGC CTGGCAGGAA CCCACCCTGT TCCCCCGGCA TCTTCCGACC
GCGATCCGGG CCCACCTGGC CAAGGAGTCC GTGCGCCAGG AAACAGAAGC CTTGTCCAAT
CCCGAAACGG GCCTGGATCC AGCCGACGGG CTGCCGCCTC TTTCCGAATA CCGGCAGACC
GAAATCGCCC GCGTGGAACA GACCTATCTC CAGGCGTTGA TGGCCGCCCA CGGTGCGGAT
ATTGCCACGG CCTGCGAGGT GGCAGGGCTG TCGCGGGCCA GGCTCTACGC CCTGCTCAAA
CACTACGGGA TTTCCCGGGA GGGCCGGTCA CGTAACGAGT GA
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| Protein sequence | MAQILIVDDD RFLCRSLCLV LEGMGHTVMC ASTLGEGRRL QQEYDYAVVI LDVWLPDGNG
LEALQGFRTD RVPPEIIILT GAGDPDGAEL AIRSGAWSYI TKPPTLNKFR LPVQRAVESF
ERRQKMPAFS LRREGIVGES SLLVQCLDVI AMSANTESPV LIAGETGTGK ELFARAIHVN
SNRAEGPFVV VDCGALTENL VESTLFGHER GAFTGADKAQ KGLIQVAHGG TLFLDEVGEL
PLGIQKTFLR VLQEKRFRPV GGTREAQSDF RLVAATNRDL DQLVTAGGFR QDLVYRLKSI
QVDLPPLRRI KGDIEMLCCH YVAKYCNRMG ISKKGYSAEF LDALLQYEWP GNVRELVNCV
AHCLSSAWQE PTLFPRHLPT AIRAHLAKES VRQETEALSN PETGLDPADG LPPLSEYRQT
EIARVEQTYL QALMAAHGAD IATACEVAGL SRARLYALLK HYGISREGRS RNE
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