Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0415 |
Symbol | |
ID | 8418220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 507481 |
End bp | 508371 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 645036976 |
Product | UspA domain protein |
Protein accession | YP_003197290 |
Protein GI | 258404548 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.189257 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAAGG ACATCGTTCT CGCCGCCACC TCGTCGCAGG TCACCGAAGC CGCTGCCGAT GCAGCCTTCG CCTTTGCCCG GAAACACGAT GCCCGACTCA TTGTCACCCA TGTCTGTGGC TTGCCCTCGC CTGGGTGGGG AGCCATAGAG CACATGATTC CATCGGGAGA AGTCGAGCGC ATCAAGAAAC AGATCCAGGA ATACTACGGC GAACGGACCT GCGATCTGGA GAATTGCTGC TACGAAGTTA TCCCCGGCGT CCCGCACAGC GAACTCCTGC GCCTGGCCCG CAAAGTCAAC GCGGACCTTA TTGTCATGGG CACGCACACC AAGGAGTTTG CCGAGAAGCG GGCCAAGATG TGGGGTATGG CCGGCTCGAC CCTGGAACGT GTCAGCCAGA AGGCGCGCTG CCCGGTCATG GTCGTCTCCC GGCCGGTGCC CGAGACTCGC ATGGACTTCA AAAACATTGT CGTGGCCACG GATTTCTCCT ACCAGGCCGA GTGCGCCATG CTCTATGCCG GGCAGATGGC CCGCCAATAC AAGGCGGCCC TGCACGTCTT CCACGTCCTG GAAAACGGCT CCGCCGGCAA GATGGCCACG GACCAGGAGA TCGACCGGGT CAAACAGCGC ATGGCCGATG AGTTTGATGA AAAGCTCAAA GGGGTCCAGG AATACCACTT TGAAACCTGG GAAGGCACGC CGGCCATGGA AATCCTCAAG TTCGCGCGCC TCAAGGACGC CGATCTGATC ATCATGGCCC ACCACTCCAA GGAAACCGAC CCGGAAAAGG CCTATCTCGG CTCCACGGTG GCCCAGGTCG CCTTGAACGC CAGCTGCCCG ACCATGAGCG TCAACCGCCA CTTCGACCTG CGGTGCGCGC TGTATGATTA A
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Protein sequence | MFKDIVLAAT SSQVTEAAAD AAFAFARKHD ARLIVTHVCG LPSPGWGAIE HMIPSGEVER IKKQIQEYYG ERTCDLENCC YEVIPGVPHS ELLRLARKVN ADLIVMGTHT KEFAEKRAKM WGMAGSTLER VSQKARCPVM VVSRPVPETR MDFKNIVVAT DFSYQAECAM LYAGQMARQY KAALHVFHVL ENGSAGKMAT DQEIDRVKQR MADEFDEKLK GVQEYHFETW EGTPAMEILK FARLKDADLI IMAHHSKETD PEKAYLGSTV AQVALNASCP TMSVNRHFDL RCALYD
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