Gene Dret_0415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0415 
Symbol 
ID8418220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp507481 
End bp508371 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content60% 
IMG OID645036976 
ProductUspA domain protein 
Protein accessionYP_003197290 
Protein GI258404548 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.189257 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAAGG ACATCGTTCT CGCCGCCACC TCGTCGCAGG TCACCGAAGC CGCTGCCGAT 
GCAGCCTTCG CCTTTGCCCG GAAACACGAT GCCCGACTCA TTGTCACCCA TGTCTGTGGC
TTGCCCTCGC CTGGGTGGGG AGCCATAGAG CACATGATTC CATCGGGAGA AGTCGAGCGC
ATCAAGAAAC AGATCCAGGA ATACTACGGC GAACGGACCT GCGATCTGGA GAATTGCTGC
TACGAAGTTA TCCCCGGCGT CCCGCACAGC GAACTCCTGC GCCTGGCCCG CAAAGTCAAC
GCGGACCTTA TTGTCATGGG CACGCACACC AAGGAGTTTG CCGAGAAGCG GGCCAAGATG
TGGGGTATGG CCGGCTCGAC CCTGGAACGT GTCAGCCAGA AGGCGCGCTG CCCGGTCATG
GTCGTCTCCC GGCCGGTGCC CGAGACTCGC ATGGACTTCA AAAACATTGT CGTGGCCACG
GATTTCTCCT ACCAGGCCGA GTGCGCCATG CTCTATGCCG GGCAGATGGC CCGCCAATAC
AAGGCGGCCC TGCACGTCTT CCACGTCCTG GAAAACGGCT CCGCCGGCAA GATGGCCACG
GACCAGGAGA TCGACCGGGT CAAACAGCGC ATGGCCGATG AGTTTGATGA AAAGCTCAAA
GGGGTCCAGG AATACCACTT TGAAACCTGG GAAGGCACGC CGGCCATGGA AATCCTCAAG
TTCGCGCGCC TCAAGGACGC CGATCTGATC ATCATGGCCC ACCACTCCAA GGAAACCGAC
CCGGAAAAGG CCTATCTCGG CTCCACGGTG GCCCAGGTCG CCTTGAACGC CAGCTGCCCG
ACCATGAGCG TCAACCGCCA CTTCGACCTG CGGTGCGCGC TGTATGATTA A
 
Protein sequence
MFKDIVLAAT SSQVTEAAAD AAFAFARKHD ARLIVTHVCG LPSPGWGAIE HMIPSGEVER 
IKKQIQEYYG ERTCDLENCC YEVIPGVPHS ELLRLARKVN ADLIVMGTHT KEFAEKRAKM
WGMAGSTLER VSQKARCPVM VVSRPVPETR MDFKNIVVAT DFSYQAECAM LYAGQMARQY
KAALHVFHVL ENGSAGKMAT DQEIDRVKQR MADEFDEKLK GVQEYHFETW EGTPAMEILK
FARLKDADLI IMAHHSKETD PEKAYLGSTV AQVALNASCP TMSVNRHFDL RCALYD