| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0398 |
|---|
| Symbol | |
|---|
| ID | 8418203 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 486104 |
|---|
| End bp | 487504 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 645036960 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003197274 |
|---|
| Protein GI | 258404532 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000000077648 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.524896 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACTG CTCTAAATCA GAGTGATATT TATAAAGAAC GTGCTCATCG GAAGTACTTT
AGCGATATGA AAGAATTATT TGACAACGTA TACGATATAA TTGACGTACC CGGGCTGTCA
CTTTTTGAAA ATATTGAAAA ACTCTGTGAG CATAAGCTAT ACAATCTCGA TCCAAAAATG
CTGTCTGCGA TCATTGAGAC CAAGCTAGAG CATTACTTTT CTGGCTTCGA ATGCCCTCTA
TGTGGTTGCA AGTGTTCTCA TAATAAAAAA TCAAAGAGAC ATATCGAAAC CACTTACGGA
ACCGTATCAT TTGATTCACC TTATTATAAA TGCAAAAACT GCGATAAATT TTATGAACCG
TACGTCTCTG CGTTGAACCT TCGAAAGGGA AAGTACCAAT ACGACGTCCA AAAAATTGTC
GCCAAAGTGG CCTCGTCGGT GCCTTTCGAT GAAACAGCGG AAATCTTGTA CGATACGCAT
GGCCTTTCCC TCTCCCAGGC TACAGTTCAT GAGTTGACCA ATGAACTAGC CGCCCATGCT
CGACTTGAAG AGATCAGCCC AGAAGCAGCA ACTATCCATG AGATTATCGA ACAGGCTACC
CGCCCCAATA AAGCCAGGCC GGTGCTTGTT TTCGCCGCAG ATGGAGCCAT GTCCCCAACT
CGAACAGAAA AAGGCAAACC CAATGCGTGG AAAGAGGCCA AAGGTATACG GGTCTACTTG
CTTGATGGGC AGCATTTAGC CCAAGTGCTG AGTTGGCATC AGATATGCGA CAAACACCGC
TTCAAATCCT TTTTGCAGCA GATTAAACAG CAAAACCTTT TCCCGGAAGA CAAAGTTCGG
ATCTGCTGTA TAGGCGACGG AGCCGGGTGG ATATGGGAGG CGATGGAAGA GGCTTTTCCA
GACGCACGGC AAATTTTGGA TTATTACCAT TGCCAAGAAC ATATCCACGA ATTTGCCAAC
GCCCGCTTTG CTGACAAGGC AGCCCGGGAC AAGTGGCTGC GTGAAACGAC AAATCGGCTC
TTTCAAAATA AACTGAGCAG TGTTCTCGCT GGATTGAGGC GAATGAAGCT CACCGGCGAG
GCAGCAGAGA AGCGAGACGC TCTGTGCTCG TATTTGTCAA AGAACAAGGA CCGCATGGAT
TACGGGAAAG CCAAGCGGGG CGGCTATCCT CTGGGCAGCG GGGCCATAGA AAGCGCTAAC
AAATTTATAA GCCACATACG GCTCAAACGC TCAGGAGCCT GGTGGAAAGT CGACCTGGCT
AACAATATCC TGGCCTTGCG CTGTTCGAGG TACAACAAAT CCTTCGATCG CTTCTTTGCC
GCCTATGAAA AAAGCCAGCG GCAGGACTTA GGGTCGGCTC AGCCCCACTT GTCGCTTTGT
CAAGGGGGTC GTCGCAAGTA G
|
|---|
| Protein sequence | MQTALNQSDI YKERAHRKYF SDMKELFDNV YDIIDVPGLS LFENIEKLCE HKLYNLDPKM
LSAIIETKLE HYFSGFECPL CGCKCSHNKK SKRHIETTYG TVSFDSPYYK CKNCDKFYEP
YVSALNLRKG KYQYDVQKIV AKVASSVPFD ETAEILYDTH GLSLSQATVH ELTNELAAHA
RLEEISPEAA TIHEIIEQAT RPNKARPVLV FAADGAMSPT RTEKGKPNAW KEAKGIRVYL
LDGQHLAQVL SWHQICDKHR FKSFLQQIKQ QNLFPEDKVR ICCIGDGAGW IWEAMEEAFP
DARQILDYYH CQEHIHEFAN ARFADKAARD KWLRETTNRL FQNKLSSVLA GLRRMKLTGE
AAEKRDALCS YLSKNKDRMD YGKAKRGGYP LGSGAIESAN KFISHIRLKR SGAWWKVDLA
NNILALRCSR YNKSFDRFFA AYEKSQRQDL GSAQPHLSLC QGGRRK
|
|---|
| |