| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0348 |
|---|
| Symbol | |
|---|
| ID | 8418153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 432648 |
|---|
| End bp | 433547 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645036914 |
|---|
| Product | protein of unknown function DUF6 transmembrane |
|---|
| Protein accession | YP_003197228 |
|---|
| Protein GI | 258404486 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5006] Predicted permease, DMT superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAAAT TGAGTGCGGC GTTGGTGGCC CTGGCTGCGT TTTGCTGGGG CCTGTCCGGC
GGGATCGGCG GGGTTCTTAT GGCCGAAGGC TGGGACCCGG TCGTGGTCTC GTTCTACCGG
GGGGCGATCG GGTTGCTGTT CGTGTGTGGC TGGCTGGCCC TGCGCCCGAT GCAAAGCGGA
TTGAAAAGTC CCCGATTATG GTCCTGGTCC GCCATTGCCG GTCTTGGCGT GGCAGGGAAC
TTCGCCTTTT ATTTTGTGAG CATTTCCGAG GGCAGTGTAG CGGTGGCGGC AACGCTTATG
TATTGCGCTC CGGTGTTCGT GTACCTTGTG TCTTTTGCGT TGAAGCTGGA AAAACCGACC
CTGCCGAAGT GGGCCGCCAT CGGACTGGTC ATGATCGGCG TGGTGCTGCT GACCCGTGTG
TATGACGTAG GGGCGGGCAG CGTCACATTG GTCGGCATCG GGGCCGGATT GCTGTCCGGG
CTTTCCTATG CGGTATTTAT CTTTGGCTTC AAGTATGCCG CACCGCACGG CAGCCCCCAG
GCAATTCTCG TCATAGCCTT CGCGGCCCTT GCCGCCATTC TCTTCTGGCT GGGTGATGCA
GAACAGACCG TGGCCGTACT CAGTACACCG AGTTGGCCCT GGTTCGCGGT GCTGGGGGTG
CTCGGCGCAG GGCTGTCGTT TCTTTTCTAT ATCGTCGGCC TGCACCATAC TGCGCCTTCC
GTGGCCTCCA TCGTGGCCAT GGTTGAACCA GTGACCGCCT CGTTATTCGG GGTCGTGGTT
TTGCACGAAA ACCTGGCCGG CCCCCAAATC CTCGGAATGG CGCTGATTCT GGTCACCGTG
ACTGCATTGA GCGTCTACTC GAGCGCGCAA ACCGAGCCTT GCGAAGATCC CCTTGTCTGA
|
|---|
| Protein sequence | MSKLSAALVA LAAFCWGLSG GIGGVLMAEG WDPVVVSFYR GAIGLLFVCG WLALRPMQSG
LKSPRLWSWS AIAGLGVAGN FAFYFVSISE GSVAVAATLM YCAPVFVYLV SFALKLEKPT
LPKWAAIGLV MIGVVLLTRV YDVGAGSVTL VGIGAGLLSG LSYAVFIFGF KYAAPHGSPQ
AILVIAFAAL AAILFWLGDA EQTVAVLSTP SWPWFAVLGV LGAGLSFLFY IVGLHHTAPS
VASIVAMVEP VTASLFGVVV LHENLAGPQI LGMALILVTV TALSVYSSAQ TEPCEDPLV
|
|---|
| |