Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0347 |
Symbol | |
ID | 8418152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 431346 |
End bp | 432314 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 645036913 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003197227 |
Protein GI | 258404485 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATACAATCGA AACACAATAC GCCGGAATAC ATCCTCTTTT TCATCGCCCC CGGGTTCTCC ATGATGGGAC TGACCTCGGC AGTGGACCCC TTGCGGGTGG CGAACCGATT CGCCCCGGAA ACCTTCTCCT GGGAGTTTGT CTCGGCCCGG GGAGGGGCGG TGACAGCGTC CAATCGCATG ACCGTGCTGA CCCGCTCTAT CCAGCGCTCC CGGCACCAAC CGGACTTAGT CCTAGTCTGC ACCGGGTTTG ATGTCGACGC CGCAGTGACA CCAAACGTTC TGGAATGGCT GCGTAAACAG GCACAAAACT CTGTGCGGCT TGGCGGGATT GATACCGGGA GCGTCTTGCT GGCCCGTGCG GGGCTGCTCA AAAATCGGCG AGCGACAATC CACTGGGAAG CCCTGGCGGC TTTTCAGGAG GACTTTCTGG ACGTCAACGC TGTGGATGAC CTCTTTGTTC TCGACCGGGA TTGCATGACC TGCTCCGGCG GCACGGCCGC CCTGGACATG ATGCTGCAGC ACATCGGGTT GCGGTACGGG GAAAGCCTGG CCAAGGATGT CTCAGAGCAG TTTTTGGTCG ACCGCATCCG GGAACCGGGG CAGGGGCAAC GGATGGACGC CACTGCCCGA TTCGGCATCC ACAGCCCGCC GCTGCGCAAG GCCGTCCAAT GTATCGAACG CCACCTCGAT GCGCCACTGA CGCAACAGCA GCTTGCCGAG CATGTGGGCA TATCTGTGCG CCATCTCCAA CGCCTTTTCC AGGAACACCT CCAGACCACG CCAACAACCT TTGACCGCAC GCTGCGACTG GAACGGGCGT GGCGGTTATT GCGCCAGACA GATTTGCCCG TTGTGGAGGT GGCTGTGGCC TGCGGATTTG CTTCAGCCAG CCACTTCGCC CGGGTCTTTC GCGAGCACTA TAAACGTTCC CCGAAAAACG TCCGTTCGCC CACAGAACAC CCTGTCTGA
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Protein sequence | MQSKHNTPEY ILFFIAPGFS MMGLTSAVDP LRVANRFAPE TFSWEFVSAR GGAVTASNRM TVLTRSIQRS RHQPDLVLVC TGFDVDAAVT PNVLEWLRKQ AQNSVRLGGI DTGSVLLARA GLLKNRRATI HWEALAAFQE DFLDVNAVDD LFVLDRDCMT CSGGTAALDM MLQHIGLRYG ESLAKDVSEQ FLVDRIREPG QGQRMDATAR FGIHSPPLRK AVQCIERHLD APLTQQQLAE HVGISVRHLQ RLFQEHLQTT PTTFDRTLRL ERAWRLLRQT DLPVVEVAVA CGFASASHFA RVFREHYKRS PKNVRSPTEH PV
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