| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0320 |
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| Symbol | |
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| ID | 8418124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 395568 |
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| End bp | 398804 |
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| Gene Length | 3237 bp |
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| Protein Length | 1078 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645036885 |
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| Product | carbamoyl-phosphate synthase, large subunit |
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| Protein accession | YP_003197200 |
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| Protein GI | 258404458 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000336143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAAA GGACTGATAT CCGGAAAATT ATGCTCATCG GCTCCGGTCC GATTATTATC
GGACAGGCCT GCGAGTTTGA CTATTCAGGC ACTCAGGCCC TCAAGGCCCT GAAAGAAGAG
GGATACGAGG TTGTCCTGAT CAACTCCAAT CCGGCAACGA TTATGACCGA TCCGGGTTTG
GCCGACCGCA CCTATGTCGA ACCCCTGGAA CCAGAAAGTG TGGCCAAGAT TATTGCCAAA
GAGCGTCCGG ATGCCTTGCT GCCGACTCTC GGCGGCCAAA CGGGCTTGAA TACGGCGGTT
TCCGTGGCCG AATCCGGGGT GCTGGAAAAA TACGGGGTCG AACTCATCGG CGCCTCACTG
GAGGTGATCC AGAAGGCCGA AAGCCGGCGC CAATTCCGGA CCGCTATGGA AAATATCGGG
CTGACTGTTC CCCAAAGCGG TATCGCCTCC AGTCTCGAGG AGGTCCGGGA ATGGACCAAC
ACCTTGAGTT TTCCCATGAT TGTCCGACCA GCCTTTACCC TGGGCGGAAC TGGCGGCGGA
GTGGCCTACA ACCGGGAGGA TCTCGAAGAG ATCGCCCGTC AGGGATTGGC GGCCAGCCCC
AGTCACGAGG TCATGCTCGA AGAGTCCGTG CTCGGCTGGA AAGAATACGA ACTCGAGGTC
ATGCGCGATA AGCACGACAA TTGCGTCATC ATCTGCTCCA TCGAAAATCT CGATGCCATG
GGAGTGCACA CCGGCGATTC CGTGACGGTC GCACCGGCCC AGACATTGAC CGACCGGGAA
TTTCAAAAGA TGCGTGACGC CTCGCTGGCG ATCATGCGCG AAATTGGCGT CGAAACCGGC
GGTTCCAACG TCCAATTCGC CGTCAATCCC GAAAACGGCG ACATGGTGGT CATCGAGATG
AACCCTCGGG TCTCCCGTTC TTCGGCCCTG GCTTCCAAAG CCACAGGATT TCCCATCGCC
AAGATCGCGG CCAAATTGGC TGTGGGCTAT ACGTTGGACG AGATCCCCAA TGACATTACC
CGCGAAACCA TGGCCTCCTT CGAGCCGACC ATCGACTATT GCGTGGTCAA GATTCCCCGA
TTTACCTTTG AAAAATTTCC CGGTTCCCAA GATTTTTTGA CCACGACCAT GAAAAGTGTC
GGGGAAACCA TGGCCATCGG CCGGACCTTC AAGGAATCCC TGCAAAAAGG GCTGCGTTCC
CTGGAGGTCG GCATGGCCGG CCTGGGCAAT GGCACCGGCG AAGACGATCT GGATGCCGAG
AGCCTGATGG CGCTTCTCAA GACCCCGAAT TCGCAGCGCC TTTTCGCTAT TCGCGACGCC
TTGCGCCAGG GGATGCCACT GGAGACCCTG TACCAGGCGA CTTTTGTCGA TCCCTGGTTT
TTGCAGCAGA TCAAGGCGAT CGTGGATTGC GAGGCCGAGC TGAAACATTT CAGCCTGGAG
CAGGCCATCA GCGCAGACAA CCCCCATATG GAAGAAGTCC TGCGCCATGC CAAGGAGTTC
GGGTTTTCCG ATCTCCAACT GGCCAATCTC TGGAAGCGCA CCGAGGACGA CATCCGGCAG
TTGCGGATCC AAATGGGGAT CACCGCTACC TATAAGCTCG TTGATACTTG CGCGGCGGAA
TTCGAAGCCT ATACGCCGTA TTATTATTCC TCGTACGAGC GGGAAAATGA AAACCGGGCT
ACGGGCAAAC GCAAGGTAGT CATCCTGGGC GGTGGCCCGA ACCGTATCGG TCAGGGGATC
GAATTCGACT ATTGCTGCGT CCACGCGTCC TACGCCTTGC GCGACATGGA TATCGAGTCG
GTCATGGTCA ATTCCAATCC GGAGACGGTC AGCACCGACT ACGACACCTC GGACAGACTC
TATTTTGAGC CCCTGACCCG CGAAGATGTC CTGAACATTA TCGAGCAGGA GCAACCCGAA
GGGGTTATTG TCCAGTTTGG CGGCCAGACG CCGCTCAATC TGGCTGTGCC GCTGCTGCGC
GCTGGCGTGC CGATTCTGGG CACGACCCCG GACTCCATCG ACCGGGCCGA AGACCGTGAG
CGGTTCCACG CTCTGCTTAA CAAACTCGGT CTCAAGCAGC CGGATAACGG CCTGGCGACC
TCTGAGGAGG GTGCCCTGGA TGTGGCCGAG CGCATCGGCT ACCCGGTGGT CGTCCGCCCC
TCCTATGTTC TGGGCGGACG GGCCATGGAA ATCGTCTACG ATTCGGATGA ACTCAAAAAT
TATTTCCGCG ATGCGGTAGT CGCTTCTCCC GACCACCCGA TCCTGATCGA CAAATTCCTG
CAAGGCGCTG TGGAAATCGA TGTCGACGCC TTGTGTGACG GGACCCAGAC CTACGTCGGC
GGGGTCATGG AGCACATTGA AGAAGCCGGT GTCCATTCCG GGGATTCGGC CTGTGTCTTG
CCGCCGCACA CCGTCAGTCA GGAGACCATC GACGAAATCC GCCGGCAGTC CAGTGCCCTG
GCTGAGGAAC TCGGCGTGGT CGGGCTGATG AACGTCCAGT TCGCAGTTCA AAACGGGGAG
ATCTTTATCC TGGAGGTCAA CCCGCGGGCC TCGCGAACGG TTCCTTTTGT CAGCAAGGCC
ACCGGTGTGC CGCTGGCCAA ACTGGCGACC CAGGTCATGA TGGGCCGGAC GCTGGAGGAC
CTTAATCCCT GGTCGATGCG TCAATGGGGA CACCTGGCGG TCAAGGAGGC GGTCATGCCG
TTTAACCGCT TCCCGGGCGT GGATGTCCTG CTTGGCCCGG AGATGCGCTC CACCGGCGAG
GTCATGGGCG TGGACACGGA ATTCGGCCTG GCCTTTATGA AGGCCCAGCT CGGTGCCGGG
CAGAAACTCC CTGCCAGCGG CACGGTGTTC ATTTCCGTCA ACGATGCCGA CAAGGATGCC
GTGGTCGAAG CGGCTCGGAC TTTTGCCCGG ATCGGATTGC GCATTGTTTC CACCGAGGGC
ACGGCGGCCT ATTTGACGCG GGCCGGTGTG GATTGCGAAC GGGTGAACAA GGTCTATGAA
GGCCGCCCCA ATGCCATCGA TCTGATCAAA AACGGCGAGA TCGATCTGGT CATCAATACC
TCCTCGGGCA AGAAAACGAT CCGGGACTCG TCTTCCCTGC GACAGACGAC CCTGCTCTAC
GGTATCCCGT ATACGACCAC AGTCGCCGGT GCCCGAGCCA TGGCCCAGGC CATTGCCGCT
TTGCAGGGGC ATGGACTGGA GGTGAAAAGC CTTCAGGAAT ACTACGGTAT GGAGTGA
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| Protein sequence | MPKRTDIRKI MLIGSGPIII GQACEFDYSG TQALKALKEE GYEVVLINSN PATIMTDPGL
ADRTYVEPLE PESVAKIIAK ERPDALLPTL GGQTGLNTAV SVAESGVLEK YGVELIGASL
EVIQKAESRR QFRTAMENIG LTVPQSGIAS SLEEVREWTN TLSFPMIVRP AFTLGGTGGG
VAYNREDLEE IARQGLAASP SHEVMLEESV LGWKEYELEV MRDKHDNCVI ICSIENLDAM
GVHTGDSVTV APAQTLTDRE FQKMRDASLA IMREIGVETG GSNVQFAVNP ENGDMVVIEM
NPRVSRSSAL ASKATGFPIA KIAAKLAVGY TLDEIPNDIT RETMASFEPT IDYCVVKIPR
FTFEKFPGSQ DFLTTTMKSV GETMAIGRTF KESLQKGLRS LEVGMAGLGN GTGEDDLDAE
SLMALLKTPN SQRLFAIRDA LRQGMPLETL YQATFVDPWF LQQIKAIVDC EAELKHFSLE
QAISADNPHM EEVLRHAKEF GFSDLQLANL WKRTEDDIRQ LRIQMGITAT YKLVDTCAAE
FEAYTPYYYS SYERENENRA TGKRKVVILG GGPNRIGQGI EFDYCCVHAS YALRDMDIES
VMVNSNPETV STDYDTSDRL YFEPLTREDV LNIIEQEQPE GVIVQFGGQT PLNLAVPLLR
AGVPILGTTP DSIDRAEDRE RFHALLNKLG LKQPDNGLAT SEEGALDVAE RIGYPVVVRP
SYVLGGRAME IVYDSDELKN YFRDAVVASP DHPILIDKFL QGAVEIDVDA LCDGTQTYVG
GVMEHIEEAG VHSGDSACVL PPHTVSQETI DEIRRQSSAL AEELGVVGLM NVQFAVQNGE
IFILEVNPRA SRTVPFVSKA TGVPLAKLAT QVMMGRTLED LNPWSMRQWG HLAVKEAVMP
FNRFPGVDVL LGPEMRSTGE VMGVDTEFGL AFMKAQLGAG QKLPASGTVF ISVNDADKDA
VVEAARTFAR IGLRIVSTEG TAAYLTRAGV DCERVNKVYE GRPNAIDLIK NGEIDLVINT
SSGKKTIRDS SSLRQTTLLY GIPYTTTVAG ARAMAQAIAA LQGHGLEVKS LQEYYGME
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