| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0293 |
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| Symbol | |
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| ID | 8418097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 363508 |
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| End bp | 364209 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645036858 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_003197173 |
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| Protein GI | 258404431 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGAGC TTATCGCTGC CCTGGACTTC CCTGACGCCG AAACCGCCTT TGCGGCCGTC
ACCCCGCTTC GCGGCGAACT GGATTGGGTC AAGGTCGGCC TGGAGCTCTT TACCGCCGCA
GGGCCGAGCA TTATTTTCCG GCTCAAGGAA CTCGGCTTTC GCGTCTTTGT CGATCTCAAA
CTCTTTGACA TCCCGAACAC CGTGCAAGGA GCAGTCCGTT CGCTGACCCG CTCCGGAGCC
GATATGTGCA CTCTCCACCT CCTGGGCGGG CAGGCCATGG CCCAGGCCGC GCTGGCAGGA
CGGGAGGAAG CCACCGGCCA GACAGGCGGA CCGCTCCTGT TTGGCGTGAC CCTGCTCACC
AGCATGGACA TCACCGACCT CCCCGGCACC ACGGCCACAA ACAGCGGACG ATTTGCCCTG
GACCTGGCGG GGAATGCGGC TGACTGGCAA CTGGACGGCG TGGTGTGTTC CGGGCATGAA
GTCCGGGCCA TCAAACAGGC CGATCCGCGG CTGGCCTGCC TGACCCCCGG CATCCGTCTC
AAAAAAAGCG CAGACGACCA GAAACGGGTC ATGACTCCGG AAAAAGCGGT CCACGCCGGC
TCCAATTTCC TGGTCGTCGG ACGGCCCATT TTCACTGCGA CTTCGCCCGT GGAAATGGTC
CGTACAATTC GCAAAAAAAT GACGCTGGAA TTCAGGGATT GA
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| Protein sequence | MAELIAALDF PDAETAFAAV TPLRGELDWV KVGLELFTAA GPSIIFRLKE LGFRVFVDLK
LFDIPNTVQG AVRSLTRSGA DMCTLHLLGG QAMAQAALAG REEATGQTGG PLLFGVTLLT
SMDITDLPGT TATNSGRFAL DLAGNAADWQ LDGVVCSGHE VRAIKQADPR LACLTPGIRL
KKSADDQKRV MTPEKAVHAG SNFLVVGRPI FTATSPVEMV RTIRKKMTLE FRD
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