| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0287 |
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| Symbol | |
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| ID | 8418091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 354987 |
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| End bp | 356234 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 645036852 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_003197167 |
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| Protein GI | 258404425 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.509541 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAATA TTTTCAAAAA CAACTATATA GAACCTGTTT ACGTATCATT TTTTTTAATT
AGCTTTTCTA TTATTCCATT TTGGTATCAC GGAATAGAAA AAACAAGATA CATACTACTA
TTTTTATTTG CAATAATACT CTACAAAAAC TCAAAAATAA TATCGTATTT AATTAAAAAC
ACATTCACTT ACCTCTTATT GGCATTTTCT TTTTTTGTAT TTATAAGTTT ACAAACCAAC
AACATCAGCC TTACAAACCT GGATGAAGTC TTAAACTGGG CGATAACTTT TTACCTTACA
ATCACCGCAT CAATAATACT CAAAGATAAA GAAAAATACA TACTATACTC TCTTATAATT
TCAGTTTTTT TATTTTTTAT AATTTCAAAT TTATTGTTTT TCCTAAACAT AGCCGAAGAA
AACCAAAATT CACATATTTA CTTTCAAAAC CTTTTTGACT TCAACTACCT ACACCTGGCA
CTAGTATTTG GAGCTACGTC AATTATAAAT ATTGTTTTTC TTACTCAATC TAAAAGTTAT
GGGCTAAAAT TTTTTCACTT TCTTGCATTT TTAGCCTCCG CTTTTATGCT AATAAAAACA
ACCTCTCGTG GAGTTATCGG CGGATGCGCC TTAAGTGCCT CAATATACTA CTTCTATCAT
GCTAAACTTA ATTCTAAGCA CATTTTAATT TTTATATTAA TTGCGTTTTC TTTCAGTATC
ATCCTATTTA AAACCCCACA GGGAATCAGA ACTAAAAATG AGATTATCCA AACATTCACT
GCAACAGAAA AAGATAAATC TTTAAGAATG CGCTTTTTTT TATGGTACGC GTCTTTCAAA
TCCTTTCTCG ACAAACCTTT TTCAGGAAAT GGATTTGAAA ACTTTCGCAA TACATATGAA
AAGCAATACC ATATTTACAA AAATAATAAA AAACTTCAGA AAAAATTCCC TCTTGTCAAA
TCTAGTGACA AAAATGCTCA CAATTTCTTT TTACATTTTC TTCTCGAAAC AGGTATATTT
GGAACTTTAG CAATTACATT ATTTTTTTGT TCAATTATAT TTTATGGCTT TAATCGATTT
TCAATGACAT CTATAGCTTC AGCACTTGCT TTAATAACCT CACTTGTGCA TTACCAAGTA
AATATGGACC TTTATAGCCC CCTGCCGAGC ACATTAACAT TTACATTATG TGGAGTAATT
GCTGGTAGCC ATATTAAAAA ACAACTCCAG ATCCCACAGA CTCTCTAA
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| Protein sequence | MRNIFKNNYI EPVYVSFFLI SFSIIPFWYH GIEKTRYILL FLFAIILYKN SKIISYLIKN
TFTYLLLAFS FFVFISLQTN NISLTNLDEV LNWAITFYLT ITASIILKDK EKYILYSLII
SVFLFFIISN LLFFLNIAEE NQNSHIYFQN LFDFNYLHLA LVFGATSIIN IVFLTQSKSY
GLKFFHFLAF LASAFMLIKT TSRGVIGGCA LSASIYYFYH AKLNSKHILI FILIAFSFSI
ILFKTPQGIR TKNEIIQTFT ATEKDKSLRM RFFLWYASFK SFLDKPFSGN GFENFRNTYE
KQYHIYKNNK KLQKKFPLVK SSDKNAHNFF LHFLLETGIF GTLAITLFFC SIIFYGFNRF
SMTSIASALA LITSLVHYQV NMDLYSPLPS TLTFTLCGVI AGSHIKKQLQ IPQTL
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