| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0280 |
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| Symbol | |
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| ID | 8418084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 343344 |
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| End bp | 344528 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645036845 |
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| Product | Glutamine--scyllo-inositol transaminase |
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| Protein accession | YP_003197160 |
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| Protein GI | 258404418 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCAG ACGTTAAGCC CCCGGTCCGG CCCAAGGACC GTTTCCTCGT CTTTGGGGCG
CCGCAGATCA AGCAGGCAGA GATCGATGAG GTCGTGGACA GTCTCAAAAG CGGTTGGCTG
GGAACCGGTC CCAAGGTGGC CCGGTTTGAG CAAGCCTTGC GGGAATATGT CGGGGCCCCT
TATGCCGCCG CGGTCAATTC GTGCACGGCG GCGCTGCATC TCGCCCTGAT CGCCGCCGGC
GTGGGGCCGG GTGACGAGGT GGTCACCACG CCGCTGACCT TCTGCGCGAC AGTTAACGCC
ATCCTCCATG CCGGAGCGAC CCCTGTCCTT GCGGACGTGG ATCCGAAGAC TATGAATATT
GATCCGGTGC GCGTTGCTGG ACGGATCACT CCCCGGACGA AGGCGCTTCT CCCTGTCCAT
TTTGCCGGTC GCCCCTGCGA CATGGACAGC CTGGTGGACT TGGCCCGGCA ACACAATCTG
CAATTAATCG AAGACTGCGC CCATGCCATT GAAACCGAGT ACCACGGGCA AAAGGCCGGA
ACCTTCGGCG ACTTCGGTTG TTTCAGTTTT TATGTGACCA AGAATGTCGT CACCGGTGAA
GGCGGAATGG TCACGGCCCG TGACGAGGAG GCCATCAAAC GGATCAAGAT GCTCGCCCTG
CACGGCATGA GCGCCGATGC CTGGAAACGG TTCTCTGACG AGGGCTACAA GCATTATTTC
GTTGCTGAGG CTGGTTTCAA ATACAATATG ATGGATATTC AGGCCGCTAT CGGGATCCAC
CAACTGGACC GGGTAGAAGC CAACTGGCAA CGCCGCTGCG CTATTTGGGA CCGCTACGTG
AAGGCCTTCG CCGATTTGCC CCTCACGTTG CCTACAGCAC CCGAGCCGCA AACCCGCCAT
GCCAGGCATT TGTTTCCTCT CCTGATTGAC ACCGACCGGG CCGGCATCTC CCGGGATGGA
TTTCTCTCGG CCATGCATGC GCAGAATATC GGGACCGGGG TGCATTATCT CAGCCTCCCC
GAGCACCCGT ATTACCAGGA GCGTCTTGGG TGGACGCCCG AAGATTGGCC CAATGCCATG
CGGATTGGGA GGCAGACCGT GAGTCTGCCC CTTTCGGCCC GGCTGAGCGA CGCGGACGCG
GACGATGTCA TTCGGGCCGT TCGCCGTGTG CTCGATCGGG AATGA
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| Protein sequence | MASDVKPPVR PKDRFLVFGA PQIKQAEIDE VVDSLKSGWL GTGPKVARFE QALREYVGAP
YAAAVNSCTA ALHLALIAAG VGPGDEVVTT PLTFCATVNA ILHAGATPVL ADVDPKTMNI
DPVRVAGRIT PRTKALLPVH FAGRPCDMDS LVDLARQHNL QLIEDCAHAI ETEYHGQKAG
TFGDFGCFSF YVTKNVVTGE GGMVTARDEE AIKRIKMLAL HGMSADAWKR FSDEGYKHYF
VAEAGFKYNM MDIQAAIGIH QLDRVEANWQ RRCAIWDRYV KAFADLPLTL PTAPEPQTRH
ARHLFPLLID TDRAGISRDG FLSAMHAQNI GTGVHYLSLP EHPYYQERLG WTPEDWPNAM
RIGRQTVSLP LSARLSDADA DDVIRAVRRV LDRE
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