Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0279 |
Symbol | |
ID | 8418083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 342354 |
End bp | 343238 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645036844 |
Product | formate dehydrogenase accessory protein |
Protein accession | YP_003197159 |
Protein GI | 258404417 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3058] Uncharacterized protein involved in formate dehydrogenase formation |
TIGRFAM ID | [TIGR01562] formate dehydrogenase accessory protein FdhE |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTTCC AACTGGAACG TGAACAACGG CGACTGGAAC GGAAAATAGA GGCGTTGCGC GGCAGAGAGG ATCTGCCCGA GCCGGTGGTC GATTTGGTGG CTGCGTTGGC CCGCCTCCAG CTTGAGGCGA TCAGCACGGC CGAGGCCGAG GTCCCGTCCA AGCAGGACAT GGCTTCAGCA GAGATGGTCC TGCAAGGGGC GCCTCTGTGG CCGCGGGAAT CGTTCGCCGT TGATTTGAAA CAAAGCCGGG AACTGGCGGG AAAGGTGCTG GATCTTTTAG CCGAAACCGG AGAACGGAAT GCCGATGCTG CGGCCACGCT GCGCCGCGCA CTGGAAAGCG GGGAACTGGA CTGGGCCGAG GCCGTGAATA AGCTCATCAT GGCCGATGAC AGTTTTTTTC AGACGTGGGC CGAACAGACG CCGGACGCCC CGGACGCCTT GCGTTTTGTG ATCCAGGCCT CCATCACCCC CAGCCTCCAG GCTGTGGCTA TGGGGGTTGA TGAACAGCGG GAAAAAGGGA CCTGGATCCA CGGACATTGC CCTGTTTGCG GGTCCTTGCC CCTGATTGGC CATTTGGAAG GCAAAGAAGG GCAGCAGCAT TTCACGTGCG CTTTTTGTCG CACCGCGTAT CGCAGCAAGC GGCTCATGTG TCCCTTTTGC GGTGAACAGG ACCACACCAA GTTGAGCTAT TTCTATGCCG ACGAGGAACC CGGCTTCCAG GTCCATGTTT GTGAGAGTTG CAAGATGTAT TTCAAGGATG TCGATTTCAG AGAACTCGAT CGGACCTCCG TGCCGGTCCT GGATGATCTG GAATCGCTGG TCATGGATAT GTTGGCCCAG GAAAAGGGCT ACGTGCGCCC CGTGCCGTCG GCCTGGGGAT TTTAG
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Protein sequence | MAFQLEREQR RLERKIEALR GREDLPEPVV DLVAALARLQ LEAISTAEAE VPSKQDMASA EMVLQGAPLW PRESFAVDLK QSRELAGKVL DLLAETGERN ADAAATLRRA LESGELDWAE AVNKLIMADD SFFQTWAEQT PDAPDALRFV IQASITPSLQ AVAMGVDEQR EKGTWIHGHC PVCGSLPLIG HLEGKEGQQH FTCAFCRTAY RSKRLMCPFC GEQDHTKLSY FYADEEPGFQ VHVCESCKMY FKDVDFRELD RTSVPVLDDL ESLVMDMLAQ EKGYVRPVPS AWGF
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