Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0267 |
Symbol | |
ID | 8418071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 330432 |
End bp | 330929 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645036832 |
Product | hydrogenase expression/formation protein |
Protein accession | YP_003197147 |
Protein GI | 258404405 |
COG category | [C] Energy production and conversion |
COG ID | [COG0680] Ni,Fe-hydrogenase maturation factor |
TIGRFAM ID | [TIGR00072] hydrogenase maturation protease [TIGR00140] hydrogenase expression/formation protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.312911 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCATCG AGACACAGCG GATCCTGGTT CTTGGGGTCG GCAATATTTT GTTTACGGAC GAGGGTATCG GAGTCCGGGC CATCGAGGAA ATGCAGTCCG GATATCAGTT TTCCGAGAAC GTGACCCTTA TGGACGGCGG GACGCTGGGG ACGCGACTCA TGGACTACAT TATGGAAAGC GACTACCTCA TTGTTGTCGA CGCCGTGCTG GGCGACAGCG ACCCAGGCTC GGTCTACCGT TTGACCGGAG AGGACCTGCG CCAGAGTCTG GCCTTCAAGA ATTCCATGCA CCAGACCGAC CTGGTGGACA CCCTGGTCTA TTGTGATCTG GCCGGGCATT GTCCTGAAGC GGTGGTCATC GGTATGGAAC CAGCCGATTA TGAAACGATG GCAGTGGGCC TTTCAGAGCC CGCCCAGGCG GCATTGCCGC ATATGATGCA GCGGGTGGCC GAGGAGATCC GGAAGGCCGG AGCGACCGCT GAACCCGTGA GCCAATAA
|
Protein sequence | MSIETQRILV LGVGNILFTD EGIGVRAIEE MQSGYQFSEN VTLMDGGTLG TRLMDYIMES DYLIVVDAVL GDSDPGSVYR LTGEDLRQSL AFKNSMHQTD LVDTLVYCDL AGHCPEAVVI GMEPADYETM AVGLSEPAQA ALPHMMQRVA EEIRKAGATA EPVSQ
|
| |