| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0265 |
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| Symbol | |
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| ID | 8418069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 327349 |
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| End bp | 328302 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645036830 |
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| Product | hydrogenase (NiFe) small subunit HydA |
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| Protein accession | YP_003197145 |
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| Protein GI | 258404403 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
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| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.595947 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATGTT TTGTTGGAAT GGGGAAAGAC GGAGTTGAGG AGCGGCTCGC CGAACGCGGT
GTGTCGCGTC GTGATTTTAT GAAATTTTGT GCCGGTGTGG CCGCCTTTAT GGGGATGGAG
GCGTCCATGG GCCCAAAAAT CGCGCAGGCC TTGACTTCCA AAACACGTCC TTCCGTGGTC
TGGCTGCACA ACGCTGAATG CACAGGGTGT TCTGAGTCGG TGCTGCGGAC CGTGTCCCCG
TACATAGACG AGTTGCTCCT GGATACCATC TCCTTGGATT ACCATGAAAC CTTGATGCAG
GCCTCTGGTG AGGCGGCTGA AGAAGCCCTG CACCACGCGG TCAAGAATCC CAATGGGTAT
ATCTGCGTCA TCGAAGGGGG GATCCCGACC AAGGACGGCG GTGTCTACGG CAAGGTCGCC
GGACGGACCA TGCTCGATAT GTCCAGCGAT ATCGCCCCCA AGGCCAAGGC TGTCATCGCC
ATCGGCAATT GCGCCTGCTT TGGCGGTGTC CAGGCCGCCA AGCCCAACCC CACCGAAGCC
AAGGGTGTCA AAGCGGCCCT GGGCCATCTT GGGGTCAATC CGGTCAACGT CTCCGGCTGT
CCGCCCAATC CCTACAACTT CGTGGGCACT GTGGTCCATT ATCTGACCAA AGGGGTGCCG
GAGCTCGACG ACAACAACCG TCCGATGCTC TTTTACGGGG AAACCGTGCA CGACAATTGC
CCGCGCCTGG GCCATTTCAA TATGGGCGAG TTCGCGCCCT CCTTTGATTC GGAAGAGGCC
AAGAAGGGGT GGTGTCTGTA CGAGTTGGGC TGCAAAGGGC CGTATACGTT CAATAACTGC
CCGAAAGTCC TGTTCAACCA AACAAATTGG CCTGTTGATG CCGGTCACCC CTGCATCGGG
TGCAGCGAAC CCGGTTTCTG GGATGGCATG TCGCCGTTCT ATGAATACTT CTAG
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| Protein sequence | MKCFVGMGKD GVEERLAERG VSRRDFMKFC AGVAAFMGME ASMGPKIAQA LTSKTRPSVV
WLHNAECTGC SESVLRTVSP YIDELLLDTI SLDYHETLMQ ASGEAAEEAL HHAVKNPNGY
ICVIEGGIPT KDGGVYGKVA GRTMLDMSSD IAPKAKAVIA IGNCACFGGV QAAKPNPTEA
KGVKAALGHL GVNPVNVSGC PPNPYNFVGT VVHYLTKGVP ELDDNNRPML FYGETVHDNC
PRLGHFNMGE FAPSFDSEEA KKGWCLYELG CKGPYTFNNC PKVLFNQTNW PVDAGHPCIG
CSEPGFWDGM SPFYEYF
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