| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0258 |
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| Symbol | |
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| ID | 8418062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 320167 |
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| End bp | 320829 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645036823 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
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| Protein accession | YP_003197138 |
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| Protein GI | 258404396 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTATT CAACAGTCTT TTTTGATCTC GACGGGACCC TGCTCAACAC CTTGGACGAT
CTGGCCGACT CCATGAATTC GGTTTTAGAG CACAACGGCC ACCCGCCCCA CCCGGTTCAG
GCGTACCGCT ACTTCGTCGG CAAAGGCATG GAGGCCCTGG TACGCCAGGC CCTGCCCGAG
CACGCCCGTT CTCCGGAACA CATCCGCCAC TGTCTGGCCC AGATGCAGGA CAGCTACGCC
CGGAACTGGG CGAACAAGAC CCATCCCTAT CCCGGTGTCC CGGACATGCT GGCCACACTC
AAAGCCAGAG GCATGCGGTT GAACATCTTG TCCAACAAAC CGCAGGCGAA CACCGAGGAG
ACTGTGGCCC ATTTCTTTGA CCCCGACTTG TTTGACGCGG TCATTGGGGC CAGAGACAAT
GTTCCCAAAA AACCGGACCC CACCGCCTTG CTGGAACTGA TGTCCTCTTT TGGCCTCGAC
AAATCGCATT GCCTGTTTGT CGGCGACTCC GCGGTGGACG TGCGTACCGG CCGCGCGGCC
GAGGTCCTGA CCATCGGTGT CTTGTGGGGA TTTCGCGATG CGCCGGAACT CACGGAAAAC
GGGGCCCAGG AACTCATCAA ATCTCCCGAT CAATTGGTCC AGCTTCTCTT TCCCGAACAC
TGA
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| Protein sequence | MPYSTVFFDL DGTLLNTLDD LADSMNSVLE HNGHPPHPVQ AYRYFVGKGM EALVRQALPE
HARSPEHIRH CLAQMQDSYA RNWANKTHPY PGVPDMLATL KARGMRLNIL SNKPQANTEE
TVAHFFDPDL FDAVIGARDN VPKKPDPTAL LELMSSFGLD KSHCLFVGDS AVDVRTGRAA
EVLTIGVLWG FRDAPELTEN GAQELIKSPD QLVQLLFPEH
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