Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0228 |
Symbol | |
ID | 8418032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 286705 |
End bp | 287649 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 645036793 |
Product | phosphonate ABC transporter, periplasmic phosphonate-binding protein |
Protein accession | YP_003197108 |
Protein GI | 258404366 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
TIGRFAM ID | [TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0990439 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCGCACGT TTCGTAACGC AATGTCGATA ATGACTTTTA TTTTGGTCCT CTGTCTGGGA GCTTTCGCCG GGTGCGATAC GGAAGATTCC CCTGTGCACG TGGATTGGGA CAAACGTGAA GAGCTCCGTC TAGAGCCCCA GCGGGAGGCG CTGACCTACG CCTATTTGCC CCAATACTCG CATACGGTGT CCTACCAGCG GCACAACAAA TTGGTGGAGT ATCTCCGCCG GACCACCGGC CTGCCGATTC GTCAAGTCTA TCCCGACACC TTTGACGAAC ACATCCACAT GGTCGCTCAG GGCAAGATCG ATATCTCGTT TTCCAATCCC ATGGTCTACG CCAAGATCGC CGAACAATTC GGGGCGAGGG CCTTCGCGCG TATCGTGGAG CCCAACGGCC GGGCCCAGTT CCGGGGGCAG ATCATCTGTC GCAGGGACAA CAAGGCCATC ACCTCCCTCG CCGATTGCCG GGGCAAGAGT TGGATCGCGG TGGATCCGTA TTCGGCTGGC GGGTATCTTT TTGATCTCGG CGTCTTTCTC GAGCACGGCC TGACGCGAGA GGATTTTTCC GAAATCGCCT TCGCCCCCGG TCCGGGCGGC AAACAGGAGA AAGTGGCCCT GGCGGTCTTT GCGGGCCGCT ACGATATCGG GTCGATACGT GAAGGGACCC TGGACATTGT CAAGGACACC ATCGACGTCG ATCAGCTCCG GATCCTGGCC CACACCCCGT GGTACCCCGG CTGGGTCTAT GCGGCGCGCA AGGGGCTACC GGACAAGACC ATCGCCAAAA TCCGGCAGGC CCTGCTGGAT CTGGACCTGG CCCACCCGCG GGACCAGGAA ATTTTGGACA GGGCGGGGTT CAAGGCCATT ATTCCCTCGA GCGACGCCGA TTACGAACCG GTGCGTGCGT TGATGCGCAC TATTGGAGTG GAAGGTGATG CTTAG
|
Protein sequence | MRTFRNAMSI MTFILVLCLG AFAGCDTEDS PVHVDWDKRE ELRLEPQREA LTYAYLPQYS HTVSYQRHNK LVEYLRRTTG LPIRQVYPDT FDEHIHMVAQ GKIDISFSNP MVYAKIAEQF GARAFARIVE PNGRAQFRGQ IICRRDNKAI TSLADCRGKS WIAVDPYSAG GYLFDLGVFL EHGLTREDFS EIAFAPGPGG KQEKVALAVF AGRYDIGSIR EGTLDIVKDT IDVDQLRILA HTPWYPGWVY AARKGLPDKT IAKIRQALLD LDLAHPRDQE ILDRAGFKAI IPSSDADYEP VRALMRTIGV EGDA
|
| |