| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0227 |
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| Symbol | |
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| ID | 8418031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 285717 |
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| End bp | 286445 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645036792 |
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| Product | formate dehydrogenase, beta subunit, putative |
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| Protein accession | YP_003197107 |
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| Protein GI | 258404365 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0939177 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAGGCA AGAGTTTCTT TATAGACTTG ACGCGCTGTA CCGCCTGCCG CGGGTGCCAA
GTGGCGTGTA AGCAATGGCA CAAGCTGCCG GCGGAAGAGA CCCGGAATTG GGGTTCGCAC
CAGAACCCGA AGGATCTCTC GTTTATCACC TATAAACTGG TCCGGTTTCA GGAGATTACT
CAAAACGGCC GGATGCAGGA TTGGCTGTTC TTTCCGGAAC AATGCCGTCA TTGCGTGGAT
CCGCCGTGTA AGCTCACTGC GGACATGTAC GACGACAAGG CCATTCTGCA GGATCCCGTG
ACCGGAGCGG TGATCTTCAC CGAACGGACG AAAAAACTGG ATATCATGGA GATCCGTGGT
TCGTGTCCCT ATGATATCCC CCGGCAGGAC GCCGATTCCA AGATCATGGG CAAATGTGAT
ATGTGCCTGG ATCGGGTCCA AAACGGCCTG TTGCCCGCCT GTGTCCAGGT TTGTCCGACC
GGAGCCATGA ACTTCGGCGA CCGCGAGGAA ATGATGGACC TGGCCAAGGA GCGGCTCAAG
ACCGTGCAGA AACGGTATCC GGAGGCCGTT CTCGGCGACG CCGAAGCGGT CCGGGTCATC
TACCTCTACG CCCGTAAGCC CGAGCAATAC CATTCATTTG CCGTGGCCTC GGCCGCCCCG
TTGCGGCAGT TCACGCGCAA GGAATTGCTG GCCAGGTTGC GCAAACCGGT CACCACCATG
CTCGGTTGA
|
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| Protein sequence | MQGKSFFIDL TRCTACRGCQ VACKQWHKLP AEETRNWGSH QNPKDLSFIT YKLVRFQEIT
QNGRMQDWLF FPEQCRHCVD PPCKLTADMY DDKAILQDPV TGAVIFTERT KKLDIMEIRG
SCPYDIPRQD ADSKIMGKCD MCLDRVQNGL LPACVQVCPT GAMNFGDREE MMDLAKERLK
TVQKRYPEAV LGDAEAVRVI YLYARKPEQY HSFAVASAAP LRQFTRKELL ARLRKPVTTM
LG
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