Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0215 |
Symbol | |
ID | 8418019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 270072 |
End bp | 271139 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 645036780 |
Product | inner-membrane translocator |
Protein accession | YP_003197095 |
Protein GI | 258404353 |
COG category | [R] General function prediction only |
COG ID | [COG4603] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.900459 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCTGT ACAGAATTCG AAAGCGCACC ACTCCCCTGA CCTGGCAATC GTGGGCCATT TTCCTCGGGG CCGTCCTGTT TTCCCTGGTC GCCAGCGGCA TCCTGCTCGC CTTGCAGGGC AAGCCGCCGC TGGAAGGCAT GCGCCTGTTT TTCCAGGGAG GATTCGGGAC ATCCTGGGCC CTGGAAGACG CCCTGGTCAA AGCGGTACCC ATCTACCTCT GCTCCTTGGG AGTGGGGATC GCCTTCCGTC TCCAGATCTG GAATATCGGG GCCGAGGGGC AATACGCCCT GGGCGCCATC GGGGCGACCT GGGCGGCTTT GCATTTTTCC CATCTCCCCG GGCTGTTGCT GCTCCCGCTC ATGCTGGTCT GCGCCACGGT GGCTGGAGGA TTCTGGGGCT TTATTCCCGC GATCCTCAAG CTACGGATGC GGGCGAATGA GATCATCGTC TCATTAATGC TCAACTACAT CGGCATCCGC CTTTTGGAAT ACCTGGTCTA CGGAGCCTGG AAGGACAGCC GCAGCTTCGG TTTTCCCATG ACCCCGGAAT TCGACCCCGC CGCGATCATC CCCTCCTTTG GCACCTCGCG GCTGCATTGG GGGCTCGTCC TTTGTGTGGT CATCGGAGTG GTCATGACCC TTTTCCTGCG TTTCAGCCGT ACCGGGTTTG AACTCAAAGT CAGCGGCGAA AGCGTGCGGG CGGCGCGGTA CGCCAGAATG CCTTACGGGA AACTGGTGGT CCTGGTCATG GTTATCAGCG GCGCCCTCGC CGGATGGGCC GGCTTCGTGG AAACCTCGGC CACCCTCGGC CGGCTCCAGC CGAGTGTTAT GGCCGGATAC GGCTACACCG CCATTGTCGT GGCCTGGCTG GCCAAATTGA GTCCGTTGCG CATCGGCATC GCCTCTTTTC TTCTGGCCGG TGTGCGGGTC GGTGTGGAGA CCTTACAGCT TGATCTCCAG GTTCCGGCCG CCTTCGGGTC TATCATGGAA GGTCTGATTT TGTTGAGCGT CCTTTCCGGT CAATTCTTCA AACACTACCG GTTCGAACGG TTGACCCGGA ACCGCTAA
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Protein sequence | MLLYRIRKRT TPLTWQSWAI FLGAVLFSLV ASGILLALQG KPPLEGMRLF FQGGFGTSWA LEDALVKAVP IYLCSLGVGI AFRLQIWNIG AEGQYALGAI GATWAALHFS HLPGLLLLPL MLVCATVAGG FWGFIPAILK LRMRANEIIV SLMLNYIGIR LLEYLVYGAW KDSRSFGFPM TPEFDPAAII PSFGTSRLHW GLVLCVVIGV VMTLFLRFSR TGFELKVSGE SVRAARYARM PYGKLVVLVM VISGALAGWA GFVETSATLG RLQPSVMAGY GYTAIVVAWL AKLSPLRIGI ASFLLAGVRV GVETLQLDLQ VPAAFGSIME GLILLSVLSG QFFKHYRFER LTRNR
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