| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0164 |
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| Symbol | |
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| ID | 8417968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 207223 |
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| End bp | 208188 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645036729 |
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| Product | hypothetical protein |
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| Protein accession | YP_003197044 |
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| Protein GI | 258404302 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0015948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.315388 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAACAA AGCTCTCGCG ACGGAATTTT TTAAAATCCC TTGGATTGGG AGCTACGGCG
GCGGTAATGC CGTCGACCTT TGCCGCAGCA GCCCGGGGCG AAGAACTGGC GACCCTGCTG
GATCTTTCCA AATGCGTCGG CTGCGAAAAC TGTGTCTACG CCTGCAAGGA GGTCAATCAG
GACAAGTTTC CTGAGCCGGA AAAACCGTTT CCCACAATGT ATCCCAGCCG GGTTCCGGTC
CAGGACTGGT CGGACAAGCG CGAGGTCAAA GACCGGCTGA CTCCCTACAA TTGGTTGTAT
ATCCAGACCG CGTATGTCGA TTACGGCGGC CAGTCCTGGG AGATCCATGT CCCCCGTCGG
TGTCTGCACT GCCAGAATCC GCCCTGCGCC AATCTCTGCC CCTGGGGGGC CGCCCGCAAA
CAGGACAACG GGATCGTGCG GATTGACGAG GCCATTTGTC TCGGCGGATC CAAATGCAAC
AAGGTCTGCC CCTGGCACAT CCCGCAGCGC CAGACCGGGG TGGGGCTGTA TCTGGATCTC
TTGCCCAGCC TCGCCGGCAA CGGGGTGATG TACAAGTGCG ACCGGTGTTT CGACCGCATC
GCCGAGGGGA AAGTCCCCGC CTGTATCGAA GCCTGCCCCT TTGATGTCCA GACCATTGGA
CCGCGCAGTG AGATCGTGGC CGAGGCCCAT CGCCTGGCTG AAAAGATGCC GGGCTTTATC
TACGGCGAGC ATGAAAACGG GGGCACGAAT ACGCTCTATG TCTCCCCCGT GCCCTTCGAT
CGACTGAACG CAGCTGTGCA ACAGGGGGCC GGTCAGCCCG ATCTCGAGCC ACACCCCGAT
ATGCTTTCTT CGGAAACCAA TCTGGCCAAG GCGATGCTCA TCGCCCCGGT GGCCGGTCTT
GCCGCAGGGG CCCTGCACGC CGTACGCTTG GTCCAAAACG AGACCAAGGA GGACACCGAT
GACTGA
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| Protein sequence | MPTKLSRRNF LKSLGLGATA AVMPSTFAAA ARGEELATLL DLSKCVGCEN CVYACKEVNQ
DKFPEPEKPF PTMYPSRVPV QDWSDKREVK DRLTPYNWLY IQTAYVDYGG QSWEIHVPRR
CLHCQNPPCA NLCPWGAARK QDNGIVRIDE AICLGGSKCN KVCPWHIPQR QTGVGLYLDL
LPSLAGNGVM YKCDRCFDRI AEGKVPACIE ACPFDVQTIG PRSEIVAEAH RLAEKMPGFI
YGEHENGGTN TLYVSPVPFD RLNAAVQQGA GQPDLEPHPD MLSSETNLAK AMLIAPVAGL
AAGALHAVRL VQNETKEDTD D
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