| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0153 |
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| Symbol | |
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| ID | 8417957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 197120 |
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| End bp | 198196 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645036718 |
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| Product | glucose-1-phosphate thymidylyltransferase |
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| Protein accession | YP_003197033 |
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| Protein GI | 258404291 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
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| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.34957 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAACT GCGCGGGACG CCAGTCTCAC CTCTCACGGT GCGCCTTGGT CCTGCAGGCA
ATCAGCCGCT CCCACGAGAA AACACCGGAG CGCAGCCTCC TCTTGCCCTT CCCTGCCCTT
CAAGCTAACA ACGCCCACGT CCTCACTGCG TCACTCGCTT CGGTATTGGA GAACGGAGTT
TCCATGAAAG GCATCATTCT CGCCGGGGGA TCCGGCACAC GGCTGTATCC GTTGACCTGG
GGCGTGAGCA AACAGCTTTT GCCCATCTAC GATAAACCCA TGATCTATTA TCCCCTTTCC
GTGCTTATGC TCGCCGGTAT CAGGGAGATT CTGATCATTT CCACACCACA GGACATCCCC
CGTTTCGAAC GGCTTCTGGG CAGCGGCGAA CAAATCGGGC TTCGCTTGAC GTATAAGACC
CAGCCGGAGC CGGAAGGGTT GCCCCAGGCG TTTGTCCTCG GGCGGGAGTT TATCGGCGAC
GACTCGGTCT GTCTCGTCCT GGGAGACAAT CTGCTTTACG GCGAAGGGCT CTCGCGGATC
CTGCAGCGGT GTGCCGCCCT GGAACAAGGG GGGATCGTTT TCGGCTATCC AGTCCGGGAT
CCGCGGCAGT ACGGCGTGGT GGAATTCGAC GCCCATGGGC GGGCCACGCG CATCGTCGAA
AAACCGGAGA AGCCGCGGTC AAAATATGCG GTCCCCGGGA TCTATTTCTA TGACAATACT
GTGACCGAGA TCGCCGCACA GTTGCGTCCC TCCTCACGCG GCGAACTGGA GATCACGGAC
ATCAACACCG CCTATCTCCA GGCTGGCACA CTCCACGTCG AAGTCCTGGG CCGCGGGTAC
GCCTGGCTTG ACGCCGGGAC CCATGAATCC CTGCACCAGG CCGCGAGCTT CGTCCAGGCT
ATCCAGGAGC GCCAGGGATT CAAACTCGGC TGTATCGAGG AAATCGCCCT GCGCAAAGGA
TACATCACGC CGGATCAGGT CCGTGAACTC GCCGCTCCCA TGGCCAAAAA CGATTACGGC
GCCTACTTGC TCCAGCTTGT CGAGGAACTG CACACCTACG GACAACCGGC CTCCTGA
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| Protein sequence | MRNCAGRQSH LSRCALVLQA ISRSHEKTPE RSLLLPFPAL QANNAHVLTA SLASVLENGV
SMKGIILAGG SGTRLYPLTW GVSKQLLPIY DKPMIYYPLS VLMLAGIREI LIISTPQDIP
RFERLLGSGE QIGLRLTYKT QPEPEGLPQA FVLGREFIGD DSVCLVLGDN LLYGEGLSRI
LQRCAALEQG GIVFGYPVRD PRQYGVVEFD AHGRATRIVE KPEKPRSKYA VPGIYFYDNT
VTEIAAQLRP SSRGELEITD INTAYLQAGT LHVEVLGRGY AWLDAGTHES LHQAASFVQA
IQERQGFKLG CIEEIALRKG YITPDQVREL AAPMAKNDYG AYLLQLVEEL HTYGQPAS
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