Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0152 |
Symbol | |
ID | 8417956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 195505 |
End bp | 196905 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 645036717 |
Product | RNA-directed DNA polymerase (Reverse transcriptase) |
Protein accession | YP_003197032 |
Protein GI | 258404290 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.765246 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.510076 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAACG GAGCCGCAGA AGGACGGGCT GGGACGCCCG TCGCCACACC CGAGGGTAGG GGACGGAATC CCCGAGAGTA CGGTAGTGGT GCGTCAAGCG TCACGGCAAC GAAGGAGTAC TCCCATCCGG AGCAGCAGAG TTTGATGGAA GCGGTGGTCG GACGCGAGAA CATGCTTGCG GCCTACAAGC GTGTACGCGC CAACAAAGGC GTCCCCGGAG TCGACGGCAT GAGCGTCAAC GACGTATGGG GATATTGCAC GCTCAACTGG GCCCGAATCA AAGAGGAGTT GCTGGACGGA CGGTACGAGC CGCAGCCGGT GCTCGGGGTG GAAATCCCTA AACCCGGCGG CGGGGTGCGC CAACTGGGCA TCCCGACGGC GCTGGACCGC CTGATACAGC AGGCGCTGCA CCAGGTGCTC TCCCCCATTT TCAACCCTCA CTTCTCCGAA TCCAGCTACG GCTTCCGGCC CGGTCGAAGT GCGCATCAGG CCGTGCTCAA GGCACGGGAG CATGCTGCCG CCGGCAAACG GTGGGTCGTG GACATGGACC TGGAGAAGTT CTTCGACCGC GTGAACCACG ACGTGCTCAT GGCGCGCGTG GCCCGCAAGG TGAAGGACAA GCGGGTGCTC GTCCTCATCC GGCGTTACCT GCAAGCGGGG CTGATGCAGG GGGGAATTGC ATCGAAACGA AAGGAGGGCA CGCCGCAAGG CGGCCCCCTC TCGCCGCTCT TGTCCAACAT CCTTCTGGAT GACCTGGACA AGGAGCTTGA ACGCAGAGGC CACGCGTTCT GCCGATACGC CGACGACTGC AATATCTACG TGCAAACAAA ACGGTCCGGC GAACGCGCAA TGGCCTCGAT CACCCGGTTT CTGACAGAGC GGTTGAAGTT GAGGGTCAAC GCGGATAAGA GCGCGGTTGA CCGGCCATGG AAAAGGAAAT TCCTTGGGTA CTCGATGACC TGGCATACGC AGCCGCGGCT CAAGGTTGCG CCCAGTGTGG TCAAACGCCT GAAACAGGCG GTACGGGAGG AATTTCGACG TGGGCGGGGA CGGTCGCTCA AGAAGACGAT AGACACCCTT GCGCCGAAAC TGCGAGGCTG GATGAACTAC TTCAAGCTGG CGGAGGTAAA GGGAGTTTTT GAAGAACTGG ACATGTGGAT TCGCCGCAGA TTGCGCAATA TCCTGTGGCG GCATTGGAAA CGACCCTACG CCCGAGCAAG GAACCTGATT CGCCGGGGAC TGACTGAAGA GCGCGCCTGG AAATCCGCCA TCAACGGCCG CGGGCCATGG TGGAACTCCG GCGCATCGCA TATGAACCAG GCATTCCCCA AGAAATACTT TGATTCACTT GGACTCGTGT CACTGCAAGA TCAACTTCGC AAAGCTCAAA GTGTCAGGTG A
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Protein sequence | MTNGAAEGRA GTPVATPEGR GRNPREYGSG ASSVTATKEY SHPEQQSLME AVVGRENMLA AYKRVRANKG VPGVDGMSVN DVWGYCTLNW ARIKEELLDG RYEPQPVLGV EIPKPGGGVR QLGIPTALDR LIQQALHQVL SPIFNPHFSE SSYGFRPGRS AHQAVLKARE HAAAGKRWVV DMDLEKFFDR VNHDVLMARV ARKVKDKRVL VLIRRYLQAG LMQGGIASKR KEGTPQGGPL SPLLSNILLD DLDKELERRG HAFCRYADDC NIYVQTKRSG ERAMASITRF LTERLKLRVN ADKSAVDRPW KRKFLGYSMT WHTQPRLKVA PSVVKRLKQA VREEFRRGRG RSLKKTIDTL APKLRGWMNY FKLAEVKGVF EELDMWIRRR LRNILWRHWK RPYARARNLI RRGLTEERAW KSAINGRGPW WNSGASHMNQ AFPKKYFDSL GLVSLQDQLR KAQSVR
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