| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0149 |
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| Symbol | |
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| ID | 8417953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 193688 |
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| End bp | 194764 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645036714 |
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| Product | Radical SAM domain protein |
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| Protein accession | YP_003197029 |
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| Protein GI | 258404287 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00717785 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.324103 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGATA TACTCGACGC GCTACGTGAG AGAATTGAAC ATGGCGGGCG GTTGTCTCGC
AGGGAGGCCG TGGAACTGGT CCAAGAAGCG ACGGTCCACG ACCTGGGCGA ACTCGGACTT
CTGGCCCGCG AACGACGCCA CGGCCGTCAG GCCTATTATG TTTACAACCA GCATCTGAAT
TATACGAATA TTTGTGAAAA TCGGTGCCGT TTTTGCGCCT ACAGCAAGCG GCGCGGTGAA
AAGGGCGGTT TCACCTATTC TGCTGCCCAG GCCCGTGCCC GGCTTGAAGA ACGCCAGGAC
GCCCCGATCC GGGAGGTGCA CATCGTCGGC GGGCTCAACC CGGCCCTGCC CTACGAGTAT
TATCTGGAGC TGATCCGGAC CGTGAAGCAG GCCCGGCCCG GTGCTCGGGT CAAAGCATTT
ACCGCGGTGG AAATCGCTTT TTTGGCCGAT ACGTACGGCA AATCGCAGAC CACCGTCCTG
GAAGAATTGA TGGCCGCCGG TCTGGACGCC CTGCCCGGGG GTGGGGCTGA GGTTTTTGAT
CCGCAACTGC GGCAGAAATT GTGCCCGGAA AAGGTCTCTG GACAACGGTG GCTGGATATC
CACCGCATCG CCCACGGGCT CGGTTTGCCC ACGAACGCGA CCATGCTCTT TGGGCATATT
GAGGGCTGGG AGGAGCGTTT GGACCATCTC GAGGCGCTGC GCGAGCTCCA GGATGAAACT
GGGGGCTTTC TGTGTTTCAT CCCGCTTCCC TATCAGCCAA AGAATAACCG CCTCGGGGGC
GTGGGGCCGG ATGGACAGGA CTATTTGCGC ATGATCGCCC TGTCGCGCCT CTTTTTGGAC
AATGTGTCGC ATCTCAAGGC GTATTGGGTC ATGGCCGGCA TCAAACCAGC CCAATTGGCT
TTGTGGGCGG GGGCGGACGA TTTTGACGGC ACCCTGGTCG AAGAACGCAT CGGTCACGCC
GCTGGAGCAG AAGCCCCGGC CGGCATGACG GTGCCGCAAC TCGAGCAGGC CATTGCCGCC
GCCGGGTTCT CGGCAGTGGA GCGGGATACC TTTTTTCAGC CAGTGGCGAC GGCGTAA
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| Protein sequence | MSDILDALRE RIEHGGRLSR REAVELVQEA TVHDLGELGL LARERRHGRQ AYYVYNQHLN
YTNICENRCR FCAYSKRRGE KGGFTYSAAQ ARARLEERQD APIREVHIVG GLNPALPYEY
YLELIRTVKQ ARPGARVKAF TAVEIAFLAD TYGKSQTTVL EELMAAGLDA LPGGGAEVFD
PQLRQKLCPE KVSGQRWLDI HRIAHGLGLP TNATMLFGHI EGWEERLDHL EALRELQDET
GGFLCFIPLP YQPKNNRLGG VGPDGQDYLR MIALSRLFLD NVSHLKAYWV MAGIKPAQLA
LWAGADDFDG TLVEERIGHA AGAEAPAGMT VPQLEQAIAA AGFSAVERDT FFQPVATA
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