Gene Dret_0131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0131 
Symbol 
ID8417935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp172603 
End bp173073 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content58% 
IMG OID645036696 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003197011 
Protein GI258404269 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000555257 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGTT TTAAAGTGGT TCCGTTGGAG AACTCGCCGG ATTATCTGGT CCTGCGCACG 
GCGATGCGCA TGAAGACCGC TTTGTACCGG ACCTTGTTCG GGTCCGGGCT CCGGGTCTCA
CCGGAACAGT GGTCGATTCT CAATCGTTTA TGGGAAAAAG AGGGGCTGTG CCAAAGCGAA
TTGGCAGAGA AGACGTCCCG GGATCGGCAT AATATGCACC GCATTCTGGG GCTGATGGAA
AAAAACGGTC TCATCCGGCG CGAGCCGGAC CCCTTGGATA GCCGTCGATC GAATATTTTT
CTGACCCAGC GGGGCCGGGA GATCAAGGAG GAGTTGGTGC CCCTGGTGGA GGATTTCGGG
GACCAGGTGT TTGCCGGCCT CAGTGACGAG GAGGTCCGTC AGTTGTGGCG GTTGCACGAG
CGCATTGGAT CCAACCTGGA GATTTTGGAA AAAGCCCAGG GCGGTGGTTG A
 
Protein sequence
MARFKVVPLE NSPDYLVLRT AMRMKTALYR TLFGSGLRVS PEQWSILNRL WEKEGLCQSE 
LAEKTSRDRH NMHRILGLME KNGLIRREPD PLDSRRSNIF LTQRGREIKE ELVPLVEDFG
DQVFAGLSDE EVRQLWRLHE RIGSNLEILE KAQGGG