| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0116 |
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| Symbol | |
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| ID | 8417920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 154942 |
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| End bp | 156075 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645036681 |
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| Product | chorismate mutase |
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| Protein accession | YP_003196996 |
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| Protein GI | 258404254 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0077] Prephenate dehydratase
[COG1605] Chorismate mutase |
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| TIGRFAM ID | [TIGR01807] chorismate mutase domain of proteobacterial P-protein, clade 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTTGA ACAACCAGGA CGAAATGACC ATGACCGATA CTTCCACTAT CTCTCTTGAA
ACCTTGCGCG ACGCCATTGA CGGTGTCGAC CAGGAACTGC TGCACCTGCT CAACCGGCGC
GCGCAATTGA GTCTGCAGGT CGGTGAGGCC AAATCCACGA CCAAGGGCGC CATTTTCAAG
CCGTTTCGGG AGAAGGCCGT TTTAGAGCGG CTGTCCGCGC ACAATCCCGG CCCATTGCCC
CAGGACCATC TGGAATCCAT TTATCGCGAG ATTCTCTCGT CTTCGCGCGC CCTGCAACGA
CCGCAACGGG TCGTCTATCT CGGACCGGAA GGCACTTTTT CCTATTTTGC TGGGGTGCAT
GCCCTGGGCG GCAGTGCTGA ATTTCATGAC CAGCCGACAC TCGAGGATGT CTTCCACGCC
GTGTCCTGCG GACGCGCGGA ACTGGGGATC ATTCCCTTGG AAAATTCCCT GCAGGGCACG
GTGGGGCAAA GCCTGGACCT GTTTTTGATG TACGAAGTCT TTATCCAGGC CGAAGTCTTT
TGTCGTATCA GCCACAGCCT GCTCAGCTGC AACGGTGACA AGGGCGGCAT CACCACCGTC
TATTCGCATC CACAGGCATT GCAGCAATGC GGCGGTTGGT TGCGCCAACA TCTCCCTCAG
GCCAAGGTCG TGCCAGTGGA AAGCACGGCC GCGGCTGCGG CCCGAGTGAA AAACGCCTCA
GAAGCCGCTA TCGGCCACAG CGCTCTGGCC GGTTTGTACC AGCTCCAGGT CGTGGCCTCC
CATATTGAAG ATCTGCCGGA GAATTGGACC CGCTTTTTGG TCATCGGCCG TGGCGCTCCG
CCGGCAGGGA ACAGGGATAA GACCTCTCTG CTGTTTTCGG TGCCGGATAA ACCCGGGGCC
TTGGCCGGGG TCCTCAATCT TTTGGCCCGT GAAGGTGTGA ATATGCGCAA GCTGGAATCT
CGGCCCATGC GCGGTGAACG GTGGAAATAC GTCTTTTTCG CTGATCTGGA GTGCGACCTG
GGACGGGAGG AGTATACCCA GCTTTTGCAA GCCCTGGAGG CCAACTGTCA CAGTTTTCGC
GTTCTGGGGA GTTACCCCAA CGGCCAAGCC CTGGATATGG GGCGGGAGGA ATAG
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| Protein sequence | MGLNNQDEMT MTDTSTISLE TLRDAIDGVD QELLHLLNRR AQLSLQVGEA KSTTKGAIFK
PFREKAVLER LSAHNPGPLP QDHLESIYRE ILSSSRALQR PQRVVYLGPE GTFSYFAGVH
ALGGSAEFHD QPTLEDVFHA VSCGRAELGI IPLENSLQGT VGQSLDLFLM YEVFIQAEVF
CRISHSLLSC NGDKGGITTV YSHPQALQQC GGWLRQHLPQ AKVVPVESTA AAAARVKNAS
EAAIGHSALA GLYQLQVVAS HIEDLPENWT RFLVIGRGAP PAGNRDKTSL LFSVPDKPGA
LAGVLNLLAR EGVNMRKLES RPMRGERWKY VFFADLECDL GREEYTQLLQ ALEANCHSFR
VLGSYPNGQA LDMGREE
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