| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0099 |
|---|
| Symbol | |
|---|
| ID | 8417903 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 133739 |
|---|
| End bp | 134851 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 645036664 |
|---|
| Product | dual specificity protein phosphatase |
|---|
| Protein accession | YP_003196979 |
|---|
| Protein GI | 258404237 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2453] Predicted protein-tyrosine phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGTCTT TTTTGCAAAA AATGTTCGGG CGCAACGATT CCGAGGAAAC CTATGAACTG
TCCTGGGTTA CGGGACAGGT CGCAGTCGGG CACGCGCCCA TGTCCTACGA AGAGTTTGAT
TCGCTCAAGC GCCAGGGCAT TACAGCCATC CTCAATCTCT GCGCAGAACT TGATGCGTTG
GTCACTTTGG AGCGGGACGC CGGATTCGAG GTCTATTTTC TGCCGGTGCC CAATGAGGAA
CCCCCGGATG TCCAGGCCAC GGACGCGGCC CTGGATTGGC TGGACGAGTG CGTCTATCTC
GGCAAGAAGG CCTTGATCCA TTGCCGGCAC GGTATCGGGA GGACCGGGAC GGTGGTCTCT
TCCTACCTCT TGCGTAAAGG GTTGGGCCAG AAATTGGTCA ACAAGCACCT CAAGGATCTG
CGGTCAAAGC CCTCCAATCT CACCCAGTGG CATTTTCTGC GCCAATACGG CAAGGCCCAG
GGGCAGTTGA CCATTCGTGA GCCGTGTCTT GAATCGCGGT GTCTTGTGGA TCTGAGTCCG
TTTTTCGACG ATATCGAGGC CTTGTTTGCC CAGATTGAGG ATCGGGCGGA GAGTGCAACG
GAGCGTTGTG GCCGGGAGCA CGCCAAATGT TGTTTCAAAA CAGTGCGCAT GAGTCTGGCT
GAGGCGGTTT ACCTCCACCA TATGTTCAAT AAGTCGGTGA CCAGCGAGAA GCGCAAACAG
AGCATGGCCG CGGCCCTGGA GGCCCTCCAG ACCCGTCAGG CCCTGGTCAG GGAGAATCCC
GGCCTGTCGC AGGCCGCTCT GGATGCCCGG TACGAGGCCC TGGACATTCC CTGTCCCTTG
CTCGGCGAAG CAAACAAGTG CCAGCTTTTT GCCTATCGCC CGGCCGCGTG CCGGGTGTTT
GATCTGCGCC AGGTCAACTC CGGTCCGGGC GTGCCCCTGC AACGCGGGCT CCAACGCATT
TCAGACAATC TGTTTATGGC TTTGACCGAA CACTTCATGC CCGGGGCGCC ACTCGAGTTT
GACCTCAATG CGGTGGTCTC CGGGAAGTTT GTCCAGAATC TCTTCCTCGA ACTCGCCCGC
AAAGAGGCTG AGCAGACAGC CGCGACGGAT TGA
|
|---|
| Protein sequence | MWSFLQKMFG RNDSEETYEL SWVTGQVAVG HAPMSYEEFD SLKRQGITAI LNLCAELDAL
VTLERDAGFE VYFLPVPNEE PPDVQATDAA LDWLDECVYL GKKALIHCRH GIGRTGTVVS
SYLLRKGLGQ KLVNKHLKDL RSKPSNLTQW HFLRQYGKAQ GQLTIREPCL ESRCLVDLSP
FFDDIEALFA QIEDRAESAT ERCGREHAKC CFKTVRMSLA EAVYLHHMFN KSVTSEKRKQ
SMAAALEALQ TRQALVRENP GLSQAALDAR YEALDIPCPL LGEANKCQLF AYRPAACRVF
DLRQVNSGPG VPLQRGLQRI SDNLFMALTE HFMPGAPLEF DLNAVVSGKF VQNLFLELAR
KEAEQTAATD
|
|---|
| |