| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0098 |
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| Symbol | |
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| ID | 8417902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 131134 |
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| End bp | 133569 |
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| Gene Length | 2436 bp |
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| Protein Length | 811 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645036663 |
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| Product | pyruvate phosphate dikinase PEP/pyruvate- binding |
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| Protein accession | YP_003196978 |
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| Protein GI | 258404236 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.567979 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTGTCA CCCAACTTTT CAAGCGCTGG ACCTATCAGG TTTTTGCTCC CGGCACGCTG
GTGCGGCAAA AATACGAGGC CTTCAAAGAG CTGTTGCAAC GCGATCAAAA GGCGTTGGAA
TACATGGCCG AGTTGGAGGA CATCGCCCTG TCGCACCGTC CGGTGGATTT CGCTCGTATC
GAGTCGCTGG CCAAGGCCTT GAGCCGGGAA GTGGAAGGGA TGGTCGAGGA TCTGGTGGTC
CTGCACCCGC TTCGCTACAG CGCCCTGCGC GATTATCTGG CCAAGGTGGA TTTTTATGTC
CGACTGGCCC TGCTCTCGGA TGAAATCCGC TGTTCGCCTC CGTATGTAGC GCGCATCGGT
GACAAGAGCG AAGAAAACCT GCTGGGCGGC AAAGGCAACA ATCTGAGCCG GATCAAACGG
GAAACCGATT ACCCGGTTCC ACCGGGTTTT GTCATCACGA CCCGGGCCTT TCACTATTTT
TTGGAAGTCA ACAACCTGCG CCACGAGCTC GACGCCCTGT TGGCCCAGGT CGATCTGGAG
GACACGGAAG CCTTGCGGGA ATTGTGCGAC CGGATGCAGC AGACTGTTCT CGCAGGCGAG
GTCCCGGTCA GCGTGGCTCG GGAAGTCGAG AAAGCCATGA GCGGTGCCGG GCTGCAGACC
ATGTCCCTCG CCTTGCGCAG CAGTGCGGTG GGTGAGGACA GTCTGGTCTC ATTTGCCGGG
CAATACATGA GTGTCCTCAA CGTGGACCCC GCCTCCTGGA CGGAGACCTA CAAAGCGATT
CTGGCCAGCA AATACGCTCC GAATGCCGTC GCCTACCGTA TCCGCAGCGG TATGGCCGAC
ACCATGGTCC CCATGGCCGT GGTGGTTATG GGTATGGTCC ATCCCCGGGT CAGCGGTATC
ATGTATACGC CTGGCGAGCA GGGCACCGAG AGCCAGCTGT CCATGATCCC GGGGTATGGC
GTTGATCTGG CCGACGGCCG GGAGTCCGGG CAACAGGCCA CGGTGTCGAG GCAGGAGGAG
GTCCGGTTCG ACAATGCGGA ACCGGTCCTG GCGCCTTCTA CGGTGGCCGC AGTGGCTCGT
GTCGGTCAGG GCTTGGAGGC GGTCTTTGCC GGTCCCCAGG ATGTTGAATG GGCCGTGGAC
CAGGAGGGGG AGGTGGTGGT GCTGCAATCC CGACCGCTTC CTGGGGGGAC ACCGGAGCCG
GTGTTCACTG AGCAGGACAC CGATGCCCTT TCCTATGCCC CGGAAGCGGT GCTCTGTCAG
GCCCGTTCGG CGAGCCCCGG CCGGGCTACT GGGCCGGTGC ATCTTTATGA TGGTCAGCCG
GAAGCCGTGC CTCCGGGGAG TGTCCTGGTC GTCGAGCACA TGACTCCGGA TCTCAGCGTC
CTGGCCGGGC GTATCTGTGC GGTGGTCGCC GCCAAAGGCA GTGCGACTTG CCATTTCGCT
TCGGTGGCGC GCGAGCAGCG CCTGCCGGCT GTTTACGGGG CGGCCTGCGC CAACCAGCTG
GATGGAGGGC GCACGGTGAG CGTGGACAGC CACGCCGGTG TCGTGCTCAA CGATGCAGTG
GTTTTTGAGC CGGAACCCCG GGAGCGGGAG GAGGCAGACG ACAATCTTCC ACCGGTACAG
CGCAAACTGG CTGCGGCCCT GGAACACATT TCGCCGTTGC ACCTGACCAA CCCTGATGAC
GAGGAATTCT CCCTGCGGCG GTGCAGGAGC ATGCACGATA TCATCCGCTT TACCCACGAA
GCCGGGGTCA AGGAAATGTT TGATCTGATC GGCGGGCGCG GCTTGAATCA GACCGGTGTG
AAGCGTTTGG TTTCCGATGT CCCGCTGGTC CTGCATGTCC TGGATGTGGA GCGGGGGCTG
CAGGAAGAAG CCCGCAAGCG CAAGGAGATC ACCCCCGAGG ATATCGTCAA CCGCCCCATG
CGTTGGCTGT GGGCCGGACT TGCCGACCCG GCGGTGGCCT GGAATCCGAA TGTGGTCCAT
TACGATTGGG ACGCCTACAA CAAGAGCCAG GCCTCGTTTG TCAACGTGGA GAAGTCGACC
ATGTTCAGCA GTTATGCCGT GCTGGGCGAC GATTATCTGC ACGGCCTGTT CCGGTTCGGG
TTCCATTTCG CGGTGGTGGA TTGTGTGGTC GGGGAGGTCC CGGAACACAA CTATCTCCAC
GTCAGGTTCA AGGGCGGGGG CGGGTTGGAC GAGCAGCGCC TGCATCGGCT TGAACTGCTC
CGGCAGCTTT TGACCGGGCA CGGATTTTCG GTGAAAACCA CTGGTGATCT GCTGGAAGGT
GTGTTGCCGC GCCAGGAAAA ACACCGTCTC CAGATGGCCC TGCATGAGTT GGGGATTATT
TTGGGCAAGA CCGTCCAACT GGATATGCGT CTGCATTCTG ATCAGGATGT GGCCGACCTG
GTGGAGGAGA TCCAAAACGT CCTGCCTGAG CGTTGA
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| Protein sequence | MFVTQLFKRW TYQVFAPGTL VRQKYEAFKE LLQRDQKALE YMAELEDIAL SHRPVDFARI
ESLAKALSRE VEGMVEDLVV LHPLRYSALR DYLAKVDFYV RLALLSDEIR CSPPYVARIG
DKSEENLLGG KGNNLSRIKR ETDYPVPPGF VITTRAFHYF LEVNNLRHEL DALLAQVDLE
DTEALRELCD RMQQTVLAGE VPVSVAREVE KAMSGAGLQT MSLALRSSAV GEDSLVSFAG
QYMSVLNVDP ASWTETYKAI LASKYAPNAV AYRIRSGMAD TMVPMAVVVM GMVHPRVSGI
MYTPGEQGTE SQLSMIPGYG VDLADGRESG QQATVSRQEE VRFDNAEPVL APSTVAAVAR
VGQGLEAVFA GPQDVEWAVD QEGEVVVLQS RPLPGGTPEP VFTEQDTDAL SYAPEAVLCQ
ARSASPGRAT GPVHLYDGQP EAVPPGSVLV VEHMTPDLSV LAGRICAVVA AKGSATCHFA
SVAREQRLPA VYGAACANQL DGGRTVSVDS HAGVVLNDAV VFEPEPRERE EADDNLPPVQ
RKLAAALEHI SPLHLTNPDD EEFSLRRCRS MHDIIRFTHE AGVKEMFDLI GGRGLNQTGV
KRLVSDVPLV LHVLDVERGL QEEARKRKEI TPEDIVNRPM RWLWAGLADP AVAWNPNVVH
YDWDAYNKSQ ASFVNVEKST MFSSYAVLGD DYLHGLFRFG FHFAVVDCVV GEVPEHNYLH
VRFKGGGGLD EQRLHRLELL RQLLTGHGFS VKTTGDLLEG VLPRQEKHRL QMALHELGII
LGKTVQLDMR LHSDQDVADL VEEIQNVLPE R
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