| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0097 |
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| Symbol | |
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| ID | 8417901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 129627 |
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| End bp | 130973 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645036662 |
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| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
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| Protein accession | YP_003196977 |
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| Protein GI | 258404235 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCA AGAAACGCAT TCTCCTTATC GATGACGAGC CCAATACCCT CAAGGTCCTT
TCGGCCTTTT TGACGAAGGA GGGGTATGAG GTCGGCACGG CAAAAGACGG CCGCAGTGGC
CTCAATCACC TCCAGGAAGG CGGTTGGGAT ATGTTGATCA CCGACCTTAA GCTGCCGGAT
ATCACCGGGC TGGACATCCT GGAGCAGGTC AAGGCCACCT GGCCGAAGCT ACCAGTGGTG
ATGATCACGG CCTACGGCAG TATCTCCAAC GCGGTCCAGG CCATGAAGCT CGGGGCGTTT
AACTACCTGA CCAAACCGGT CGACCCCGAC GAACTCCTGT TGCTGGTCCA GAATGTGTTC
GAACGCAGCC AGCTCCTGGA AGAGAACCAG ACCATGCGCC GTCAGCTCAG GGACCGCTAC
AGCCTGGGCA ACATGGTCGG TAAGAGCAAG GCCATGCAGG AGCTTTTCAA CCTGATCGAA
AAGGTGGCCC AGTACGAAGC CAATGTCCTG GTGACCGGGG AAACCGGGAC CGGCAAGGAA
TTGGTGGCCC GCGGCATCCA TTATGCCGGG CAGGAAGAGA ATCTGCCGTT CGTGCCCATC
GATTGTGCGG CCGTGCCGGA GACCCTGCTG GAATCAGAGT TGTTCGGGCA CAGCCGCGGT
GCCTTCACCG GAGCGGCGGA GCAGAAAAAA GGCCAGATCG AACTGGCCCA CGGCGGCACC
CTTTTCCTGG ACGAAATCGG GGAACTGCCG CTTGCACTGC AGAAGAAATT TCTCCGTTTT
CTCCAGGAAA AGGAGATCGT CCGCCTGGGC GAGACGCGGC GGCGCAAGGT CGATGTACGG
ATTATCGCGG CGACAAACCG GGATCTTGAA GCTGAAATCG CGGCCGGGCA ATGGCGGGAG
GATCTTTTTT ACCGCCTCAA TGTCATCAGC ATTGAGATCC CGCCGTTACG GGAGCGCAGA
GACGATATCC CACCGCTGGT GAACCATTTT CTGGCCAAAT ACAACGCCCA GAACGGCAAG
GCGATCCAGG GGATGACCGG GGAGGTCATG GAGGTCTTCA TGGCCTATGA CTGGCCGGGC
AATGTCCGTG AATTGGAAAA TGTGATCGAA CGGGCCGTCG TGCTGTGCAT GGGCGACAGC
ATCGCCATGA GCTGTCTGCC CCCGAAGCTT CAGGAGCGCA GCGCACCGGC ACCGAGCACA
GACGGGGTCA ATCTCATGGA GATGGAGAAG CGGCTCATTG TCCAGACTTT GGAAAAGACA
GAGCAGAACC AGTCGGCCGC AGCCAGGGAA CTCGGGATTT CCCGCAAGCA ATTGCGGACC
AAGATGAAGC ACCACGGTCT ATTGTAG
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| Protein sequence | MSTKKRILLI DDEPNTLKVL SAFLTKEGYE VGTAKDGRSG LNHLQEGGWD MLITDLKLPD
ITGLDILEQV KATWPKLPVV MITAYGSISN AVQAMKLGAF NYLTKPVDPD ELLLLVQNVF
ERSQLLEENQ TMRRQLRDRY SLGNMVGKSK AMQELFNLIE KVAQYEANVL VTGETGTGKE
LVARGIHYAG QEENLPFVPI DCAAVPETLL ESELFGHSRG AFTGAAEQKK GQIELAHGGT
LFLDEIGELP LALQKKFLRF LQEKEIVRLG ETRRRKVDVR IIAATNRDLE AEIAAGQWRE
DLFYRLNVIS IEIPPLRERR DDIPPLVNHF LAKYNAQNGK AIQGMTGEVM EVFMAYDWPG
NVRELENVIE RAVVLCMGDS IAMSCLPPKL QERSAPAPST DGVNLMEMEK RLIVQTLEKT
EQNQSAAARE LGISRKQLRT KMKHHGLL
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