| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0077 |
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| Symbol | |
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| ID | 8417881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 102208 |
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| End bp | 103581 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645036642 |
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| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
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| Protein accession | YP_003196957 |
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| Protein GI | 258404215 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACCC ATATACTCAT TATCGACGAC GAAAAGAACT ACCTGCTTTT GCTCGAGACC
ATGCTGGCCG AAGAGGGTTA CGCGGTCACG ACCCAGCAGG ACCCGCAACT CGCCCTGGAT
TACCTCGGCG AGTCCGAGGT CGACGTGGTC ATCACCGACA TGAAGATGCC CCATGTCAGC
GGGCAAAAGG TCCTGGAAGA GGTCAAAAAG CACTCCCCCC ATATCCCGGT GCTGATCATG
ACCGCCTTCG GCTCCATTGA CGGCGCTGTA GAGGCCATGA AGTGCGGGGC CTTCGACTAT
ATCACCAAGC CGTTTAGTAA CGACGAACTG CTGCTCTCCG TGAGCAAGGC CGGCAAACTC
GCCCAGGCCG AGCGGGAAAA CCGGCTTTTG CGCCAGAGTC TGGAGGACCG TTTCGGCGTG
CACCAGATCA TCGGCCGCAG CAAAGCCATC CGAGATGTTC TGGACATGAT CGGGCGCGTT
GCCGCCAGCC GCAGTACGGT CCTCTTGACT GGCGAATCCG GCACCGGCAA GGAATTGGTC
GCCCGCGCGG TCCACTTCGC GTCCGACCGC GCCGGTGGGC CGTTCGTACC GGTCAACTGT
ATGGCGCTGA ACCCCGGGGT CCTGGAAAGT GAACTCTTCG GGCACGAGAA GGGGTCCTTT
TCCGGGGCGG TCGCCCGCCG CCGGGGACGC TTTGAGATGG CCCACACCGG GACCCTGTTT
CTCGACGAGA TCGGCGAACT CTCCCAGGAA ACCCAGGTCA AACTGCTGCG GGTGCTGCAA
GAACGGACCT TTGAACGCGT CGGCGGCACC ACGCCCGTCC AGGTCGACAT CCGGCTTATT
GCCGCCACGA ACAAGGATCT TGCCGCTGCT GTAAGTGCCG GCACCTTCCG CGAAGACCTC
TACTACCGGC TCAATGTGGT CCAGATCCCG CTGCCCGCTT TGCGTGAACG GCGCGAGGAC
ATTCCCCTGC TCGCCGCCCA TTTTCTCAAA CGCTACGCCG AAGAAAACAA CGCCGAGGTT
ACCGAATTCG CCTCCGACGC CATCGACTAT CTGACCGCCT TTGAATGGCC CGGTAACGTC
CGGCAGCTGG AAAATGTCGT CGAACGGTGC GTGGTTCTGG CCCGCTCCTC CCAAATCTCC
GTCAACGACC TCCCCCCGGA AGTCAAAGAC GAAGAGTCGC AATTCAAAAG CGCTGTGGAC
CTGCTGCCGT CCAAACTCAA TCTCGGTGAG TCGCTGGAAA AGATCGAGGC CGCGTTGATC
CGCCGGGCCC TGGCCAAGAC CAACTTTATC CAGGTCAAGG CCGCCGAAAT GCTCGGCATC
TCCAAATCTC TTCTGCAGTA CAAGCTTAAA AAATATAATA TTTCCGGAAA ATAA
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| Protein sequence | MATHILIIDD EKNYLLLLET MLAEEGYAVT TQQDPQLALD YLGESEVDVV ITDMKMPHVS
GQKVLEEVKK HSPHIPVLIM TAFGSIDGAV EAMKCGAFDY ITKPFSNDEL LLSVSKAGKL
AQAERENRLL RQSLEDRFGV HQIIGRSKAI RDVLDMIGRV AASRSTVLLT GESGTGKELV
ARAVHFASDR AGGPFVPVNC MALNPGVLES ELFGHEKGSF SGAVARRRGR FEMAHTGTLF
LDEIGELSQE TQVKLLRVLQ ERTFERVGGT TPVQVDIRLI AATNKDLAAA VSAGTFREDL
YYRLNVVQIP LPALRERRED IPLLAAHFLK RYAEENNAEV TEFASDAIDY LTAFEWPGNV
RQLENVVERC VVLARSSQIS VNDLPPEVKD EESQFKSAVD LLPSKLNLGE SLEKIEAALI
RRALAKTNFI QVKAAEMLGI SKSLLQYKLK KYNISGK
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