Gene Dret_0044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0044 
SymbolinfC 
ID8417847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp59229 
End bp59750 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content57% 
IMG OID645036608 
Producttranslation initiation factor IF-3 
Protein accessionYP_003196924 
Protein GI258404182 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATAGCTTCGC CTACGAAAGC ACGCCGTAAC CATCAAATCC GGGTACCCGA AGTTCGGGTG 
GTCAACTCGG ATGGAGAACA AGTTGGCGTG ATGCCTACAA ATGAAGCCCG GCAGATGGCC
GAGGAGCAGG GGCTTGATCT GGTGGAAGTG TCCCCCAAGG CACGTCCGCC TGTCTGCAAA
GTCATGGACT ATGGCAAGTA CCAGTACGAG CAAAAGAAAC GTACTCAGGA AGCCAAGAAA
AAGCAGACCC AGGTCCAACT CAAGGAAGTC AAGTTCCGCC CCAAGACCGA TGAGCACGAT
TACCAGACCA AGGTCCGCCA CATCCAGCGG TTTCTGGAAA AAGGCGACCG TTGCAAGGTG
ACGATTTTCT TCCGTGGCCG GGAGATCGTG CACAAGGATC GCGGTCAGGA AATCCTGGAT
CGGGTCCAAC GGGATCTGGC CGAGGAAGCC AAGGTGGAAC AACAGGCCCG GGTCGAGGGT
CGGACGATGA GTATGACCCT GGCGCCGGTT GCGAAACGGT AG
 
Protein sequence
MASPTKARRN HQIRVPEVRV VNSDGEQVGV MPTNEARQMA EEQGLDLVEV SPKARPPVCK 
VMDYGKYQYE QKKRTQEAKK KQTQVQLKEV KFRPKTDEHD YQTKVRHIQR FLEKGDRCKV
TIFFRGREIV HKDRGQEILD RVQRDLAEEA KVEQQARVEG RTMSMTLAPV AKR