| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0032 |
|---|
| Symbol | |
|---|
| ID | 8417834 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 34415 |
|---|
| End bp | 35209 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 645036595 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003196912 |
|---|
| Protein GI | 258404170 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTTTG TAGAAGCCCG CGGGATTACA TTCGGATACC GTCCCGGGGA ATCCGCGGTG
GTCTCCGGCG TGGATCTGGC GGCAGAGAAA GGGCGGCTGC ATGTCTGCAT CGGGCCCAAC
GGTGCCGGGA AGAGCACCCT TTTGGCGTTG CTGGCCGGGT GGCTGCAGCC TGAAAGCGGG
CGGGTCCTGA TCGAGGGGGG GGACGTCCAC CGGATGGGGC GGCGGCGACT CGCCCGGCAG
GTGGCTGTGC TCGAACAGGA CCAGGCGGTG GTCCCCCATT TGACGGTCGA GCAACTCGTG
CTTTTGGGAC GGACACCGTT TTTGGGCTGG CTCGGTTGGG AGGGGCAGCG CGACCGGAAA
TTGGCTGAGG AGGCGATGGT TTTCACCCAT GTGGATCATC TTGCCGCGCG CCGTCTGGAG
GAACTCAGCG GCGGGGAACG CCAGCGTGTC CATCTCGCAC GGGCTTTGTG CCAACAGCCG
CAATTGCTGC TGTTGGATGA GCCCACCGCC TCGCTTGATC CGGCGCACCA GGTGCGGATC
ATGGATTTAC TGCAGCGCTT GTGCCGGGAG CAGGGGTTGT GCGTCTGCCT TGTCTCCCAC
GATCTGCATC TGGCGGCCCT GTACGCCGAT CACGTCGTCT TGTTGCAGGA GGGGCGTGTC
CTGGGGCAGG GGCCGCCAGG AGAGACCATG ACCTTCTCTT TGCTCGAACA GGCCTACGGC
TGTGTCATGC TCGTGGAGCA GAGCCGGCTC GGTGTGCCGC TGGTGACTCC GGTTCCGAAG
CGATTCTTGG AATAA
|
|---|
| Protein sequence | MAFVEARGIT FGYRPGESAV VSGVDLAAEK GRLHVCIGPN GAGKSTLLAL LAGWLQPESG
RVLIEGGDVH RMGRRRLARQ VAVLEQDQAV VPHLTVEQLV LLGRTPFLGW LGWEGQRDRK
LAEEAMVFTH VDHLAARRLE ELSGGERQRV HLARALCQQP QLLLLDEPTA SLDPAHQVRI
MDLLQRLCRE QGLCVCLVSH DLHLAALYAD HVVLLQEGRV LGQGPPGETM TFSLLEQAYG
CVMLVEQSRL GVPLVTPVPK RFLE
|
|---|
| |