| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0009 |
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| Symbol | |
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| ID | 8417811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 8770 |
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| End bp | 10440 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645036572 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_003196889 |
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| Protein GI | 258404147 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.961342 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAGCA GGAAAATGAC CCAAGGTTTG GAGCGTGCCC CACATCGCTC ACTGCTTTAT
GCGACCGGTA TGACCCGGGA AGAAATGGAC CGTCCGCTGA TCGGGGTGGT CAACGCCGCG
AATGATATTG TTCCGGGGCA TATCCATCTC GGGACCATCA GCCAGGCCGT GAAAGACGGC
GTGCGCATGG GCGGCGGGAC ACCGCTTTCG TTTCCGGCCA TCGGGGTTTG CGACGGGCTG
GCCATGGGGC ATGAAGGCAT GCGCATGAGT CTGCCGAGCC GGGAGATCAT CGCCGATTCC
ATCGAACTCA TGGCCACCGC TCATCCGTTT GACGGTCTGG TGCTCATCCC CAACTGCGAC
AAGATCGTCC CGGCTATGCT CATGGCCATG CTGCGGTTGA ATATCCCGGC GATCCTGGTC
AGTGGCGGGC CGATGCTGGC TGGGAAGTCT AAGGGGCAAG CGACGGATCT GATCAAGGTT
TTTGAAGGAG TTGGGCAGGT CAAGCGCGGC ACCATGCCCT CCGAAGAACT CGACGAGTTG
GAGCAATCGG CTTGCCCCGG TTGCGGCTCC TGTTCAGGGA TGTTTACTGC CAATTCCATG
AATTGTCTGG CTGAAGCCAT CGGCTTGGCC CTGCCCGGCA ACGGGACCAT TCCAGCAGTG
GCCGCCGGCC GAGTCCGTCT GGCCAAGGCC GCTGGGCAGC AGGTGCTCCA TCTGGTTGAA
AAGCAGATCA CACCACGCTC CATTGTCACG GCCGAGAGTG TGGCCAATGC AGTGACCGTG
GACATGGCTC TGGGGTGCTC GACCAATACG GTGCTCCATC TGCCGGCGAT TTTTCGGGAG
GCCAAGCTCG AACTCGGTCT GGACATCTTC GACGCCATCA GCAGCAAGAC CCCGAACCTC
TGCCGGTTGT CGCCTGCCGG TCCGGATCAT ATCGAAGACC TCGATCAGGT CGGCGGAATT
CCGGCGGTCA TGCAGGAACT CGCTTCCGGT GGGCTGTTGA ACACGGGTGT CGCCACTGTG
ACCGGTCGCA CCCTGCAAGA GAATCTGGCC TCTGTGCAGC GCCCCGGGCA CCAGGAGGTC
GTCAGATCGC TGGACAACCC GTATTCCGAG CGGGGAGGGA TCGCCATTTT GCGCGGCAAC
ATCGCGCCGG ACGGGGCGGT AGTCAAACAG TCCGCAGTCC ATCCGGACAT GATGGTCCGC
TCAGGACCGG CGAGAGTCTT TGACAGTGAG GAAGACGCGG TGGAGGCCAT TTTGGGCGAT
GCGATCTCGG CTGGCGATGT CATCGTCATC CGGTACGAGG GACCGAAAGG CGGCCCTGGG
ATGCGAGAGA TGCTTTCCCC CACCTCGGCT ATTGCCGGCA TGGGGTTGGA CGCTGATGTG
GGCTTGATCA CTGACGGACG TTTCAGCGGG GGCACACGCG GCGCGGCCAT CGGTCATGTC
TCTCCCGAAG CGGCTGAGGG CGGGGTTATT GGCCTGATCG AAGAAGGGGA TACCATCCAT
ATCAATATCC CGGAACGGCG GCTGCAACTC GAGGTCGAGG CAAGCGAACT TCAGCGCCGT
CGCGAGGTCT GGCAGCCGGT GCATAAAGAA GTCCAGTCCC CGGTTTTGCG CCGGTATCGG
AAGTTGGCCA CCTCCGCAGC CCAGGGAGCG GTGTACCGCG ACGACGAGTA A
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| Protein sequence | MRSRKMTQGL ERAPHRSLLY ATGMTREEMD RPLIGVVNAA NDIVPGHIHL GTISQAVKDG
VRMGGGTPLS FPAIGVCDGL AMGHEGMRMS LPSREIIADS IELMATAHPF DGLVLIPNCD
KIVPAMLMAM LRLNIPAILV SGGPMLAGKS KGQATDLIKV FEGVGQVKRG TMPSEELDEL
EQSACPGCGS CSGMFTANSM NCLAEAIGLA LPGNGTIPAV AAGRVRLAKA AGQQVLHLVE
KQITPRSIVT AESVANAVTV DMALGCSTNT VLHLPAIFRE AKLELGLDIF DAISSKTPNL
CRLSPAGPDH IEDLDQVGGI PAVMQELASG GLLNTGVATV TGRTLQENLA SVQRPGHQEV
VRSLDNPYSE RGGIAILRGN IAPDGAVVKQ SAVHPDMMVR SGPARVFDSE EDAVEAILGD
AISAGDVIVI RYEGPKGGPG MREMLSPTSA IAGMGLDADV GLITDGRFSG GTRGAAIGHV
SPEAAEGGVI GLIEEGDTIH INIPERRLQL EVEASELQRR REVWQPVHKE VQSPVLRRYR
KLATSAAQGA VYRDDE
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