Gene Dred_3325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3325 
Symbol 
ID4955483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand- 
Start bp3605996 
End bp3606616 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content39% 
IMG OID640182516 
Productsingle-stranded nucleic acid binding R3H domain-containing protein 
Protein accessionYP_001114650 
Protein GI134301154 
COG category[R] General function prediction only 
COG ID[COG1847] Predicted RNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0161391 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGGTAG TAGAAAAAGT CGCTAAATCC ATAGATGAAG CCATTGAATT AGGTCTTCAA 
GAATTGGGTG TGTTACGGGA CGAGGTAATT ATTGAAGTAA CAGCAGAACC CTCTAAGGGT 
TTATTTGGAT TAATTGGATC TCGTCCAGCC AAGGTTAGAT TAACACTAAA GGATGATCCG 
GTAAGACGTA CAGATCGATT ATTGCAAAGT ATATTTAAGT GCATGGATAT TCCTGTGGAA 
GTAAATATTA AAGAACAAGA TCAAATGTTA AACGTCGCCA TAGAAGGACC GGACCTAGGG 
GTATTAATTG GTCGCAGGGG AGAAACCCTC GATTCACTTC AATATTTAGT CAATTTAGCT 
ATTAATAAAA ATCAAGAACA GCGACGGAAA GTTATTCTTG ATGTTGAGGG ATATCGTCAC 
CGCCGGGAAG AGACTTTACA AAAGCTGGCC ACAAGATTGG CAGACAAAGC AAAACAAAGA 
GGCAGAAGTG TTGTTTTGGA ACCAATGAAC TCACAGGAAA GAAGAGTTAT ACACACTGCC 
TTGCAAGGGC GGGATGATAT CTATACATTC AGTGAAGGTG AAGAACCCTT TAGGAAAATT 
ATAATTTCAC CGAAAAAATA A
 
Protein sequence
MKVVEKVAKS IDEAIELGLQ ELGVLRDEVI IEVTAEPSKG LFGLIGSRPA KVRLTLKDDP 
VRRTDRLLQS IFKCMDIPVE VNIKEQDQML NVAIEGPDLG VLIGRRGETL DSLQYLVNLA 
INKNQEQRRK VILDVEGYRH RREETLQKLA TRLADKAKQR GRSVVLEPMN SQERRVIHTA 
LQGRDDIYTF SEGEEPFRKI IISPKK